RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ZC3H4Q9UPT8 1303 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 FOXN3O00409 490 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 CYP1A1P04798 512 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 CPA3P15088 417 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 OGNP20774 298 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 ME2P23368 584 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 NUP62P37198 522 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 HPCAL1P37235 193 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 GP5P40197 560 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 KLK7P49862 253 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CCT8P50990 548 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CCNG1P51959 295 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SCARF1Q14162 830 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 KCNT1Q5JUK3 1230 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 NEK10Q6ZWH5 1172 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ZNF571Q7Z3V5 609 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 RNF135Q8IUD6 432 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SCN4BQ8IWT1 228 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MICU2Q8IYU8 434 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 TMEM132CQ8N3T6 1108 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CCDC33Q8N5R6 958 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLC44A5Q8NCS7 719 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ACTRT2Q8TDY3 377 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SH3KBP1Q96B97 665 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ZNF669Q96BR6 464 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 RUSC1Q9BVN2 902 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 TLR10Q9BXR5 811 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 FBXO44Q9H4M3 255 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MROH8Q9H579 483 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MAGEE1Q9HCI5 957 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CD248Q9HCU0 757 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CCNB1IP1Q9NPC3 277 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 AHSPQ9NZD4 102 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 BCS1LQ9Y276 419 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLC4A7Q9Y6M7 1214 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ATP9AO75110 1047 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 RECQL5O94762 991 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 DLGAP3O95886 979 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 UBTFL6P0CB48 400 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 CD44P16070 742 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 IL12AP29459 219 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PPP2R1BP30154 601 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 DLG4P78352 724 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 KLHL12Q53G59 568 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SH3RF1Q7Z6J0 888 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 FAM83AQ86UY5 434 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 DHFR2Q86XF0 187 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 DIS3LQ8TF46 1054 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 HES6Q96HZ4 224 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PPP1R10Q96QC0 940 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 TINF2Q9BSI4 451 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MRIQ9BWK5 157 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 FAM49AQ9H0Q0 323 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 ASB7Q9H672 318 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PNPLA3Q9NST1 481 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MAGED2Q9UNF1 606 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 KCNH4Q9UQ05 1017 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PCDHA11Q9Y5I1 949 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CDK5RAP2Q96SN8 1893 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 BCL9LQ86UU0 1499 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MYO1GB0I1T2 1018 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CYTH3O43739 400 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ATP9BO43861 1147 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 RAD17O75943 681 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PGK2P07205 417 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 IL1R1P14778 569 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CCNA2P20248 432 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 RAP1GAPP47736 663 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLC11A2P49281 568 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLC12A3P55017 1021 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CYP51A1Q16850 503 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MROH9Q5TGP6 573 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 TSHZ1Q6ZSZ6 1077 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 STRA8Q7Z7C7 330 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 HERC6Q8IVU3 1022 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MICALL2Q8IY33 904 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 OR6J1Q8NGC5 347 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PTCD2Q8WV60 388 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 ZNF75CPQ92670 426 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 OSBPL6Q9BZF3 934 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 LRMDAQ9H2I8 198 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 WDCPQ9H6R7 721 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 GOLGA4Q13439 2230 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 COL5A2P05997 1499 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 TRAFD1O14545 582 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 TBC1D12O60347 775 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 OCM2P0CE71 109 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 OCMP0CE72 109 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 PIK3R1P27986 724 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ELF3P78545 371 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 MTMR2Q13614 643 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 POLD3Q15054 466 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 SDE2Q6IQ49 451 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 C11orf88Q6PI97 169 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 GALNT4Q8N4A0 578 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.53□□□□□ -1.68
CHD9-201ENST00000219084 KIAA0895Q8NCT3 520 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 GLMNQ92990 594 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ART4Q93070 314 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms