RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 M0QZ92 97 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 ITGAVP06756 1048 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 CD52P31358 61 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 ELK3P41970 407 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 GPX6P59796 221 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 TRIM71Q2Q1W2 868 aaKnown RBP10.33□□□□□ -0.76
USP11-201ENST00000218348 SYPL2Q5VXT5 272 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 DSTYKQ6XUX3 929 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 DEPDC1BQ8WUY9 529 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 VWCEQ96DN2 955 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 RNF157Q96PX1 679 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 RSAD1Q9HA92 442 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 SPATA7Q9P0W8 599 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 PDCD11Q14690 1871 aaKnown RBP10.33□□□□□ -0.76
USP11-201ENST00000218348 MYBPHLA2RUH7 354 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 APOC4-APOC2K7ER74 178 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 DNM1LO00429 736 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 APOC2P02655 101 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 CA4P22748 312 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 IL4RP24394 825 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 CYP2F1P24903 491 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 ABL2P42684 1182 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 SULT1E1P49888 294 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 COPS2P61201 443 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 CAV1Q03135 178 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 OLIG2Q13516 323 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 ZBTB6Q15916 424 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 ANKRD20A8PQ5CZ79 823 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 SLC30A9Q6PML9 568 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 POLNQ7Z5Q5 900 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 B3GALNT2Q8NCR0 500 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 BBOF1Q8ND07 529 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 C3orf58Q8NDZ4 430 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 NKD2Q969F2 451 aaPredicted RBP10.33□□□□□ -0.76
USP11-201ENST00000218348 SERPINB12Q96P63 405 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 LGMNQ99538 433 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 WDR83Q9BRX9 315 aaKnown RBP10.33□□□□□ -0.76
USP11-201ENST00000218348 CNOT10Q9H9A5 744 aaKnown RBP10.33□□□□□ -0.76
USP11-201ENST00000218348 LRRC4Q9HBW1 653 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 DDX43Q9NXZ2 648 aaKnown RBP10.33□□□□□ -0.76
USP11-201ENST00000218348 NKIRAS1Q9NYS0 192 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 IL1RAPL1Q9NZN1 696 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 NOD1Q9Y239 953 aa10.33□□□□□ -0.76
USP11-201ENST00000218348 CCDC78A2IDD5 438 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 APOL1O14791 398 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 CAPN9O14815 690 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 CDH16O75309 829 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 ASGR1P07306 291 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 BRCC3P46736 316 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 CACNA2D1P54289 1103 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 SLC10A2Q12908 348 aaPredicted RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 DNAJC3Q13217 504 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 LRRC23Q53EV4 343 aaPredicted RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 KIAA0319Q5VV43 1072 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 CASC4Q6P4E1 433 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 PPP1R21Q6ZMI0 780 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 ARHGAP22Q7Z5H3 698 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 PQLC3Q8N755 202 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 VRTNQ9H8Y1 702 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 SLCO1B3Q9NPD5 702 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 KRT82Q9NSB4 513 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 DNAAF2Q9NVR5 837 aaKnown RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 AP4E1Q9UPM8 1137 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 ITM2BQ9Y287 266 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 CLUHO75153 1309 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 A0A1W2PQ45 241 aaPredicted RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 A0A1W2PQY0 241 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 E2F8A0AVK6 867 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 M0QYT0 321 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 EZRP15311 586 aaKnown RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 ACLYP53396 1101 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 ARL4CP56559 192 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 BST2Q10589 180 aaKnown RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 MAP7D3Q8IWC1 876 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 PPIL6Q8IXY8 311 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 FUKQ8N0W3 1084 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 PDIK1LQ8N165 341 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 SENP8Q96LD8 212 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 AGAP3Q96P47 875 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 TGS1Q96RS0 853 aaKnown RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 STMN4Q9H169 189 aaPredicted RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 TRABDQ9H4I3 376 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 RABL2AQ9UBK7 228 aaPredicted RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 RANBP2P49792 3224 aaKnown RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 B3GAT3O94766 335 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 CD4P01730 458 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 USP17L7P0C7H9 530 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 KRT4P19013 534 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 GCAP28676 217 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 RPA3P35244 121 aaPredicted RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 GABRB2P47870 512 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 MORF4L2Q15014 288 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 SIX6OS1Q8N1H7 587 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 ANKRD52Q8NB46 1076 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 SLC7A14Q8TBB6 771 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 FNIP1Q8TF40 1166 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 PLEKHA5Q9HAU0 1116 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 KLC4Q9NSK0 619 aa10.32□□□□□ -0.76
USP11-201ENST00000218348 TRMT13Q9NUP7 481 aaKnown RBP10.32□□□□□ -0.76
USP11-201ENST00000218348 TMEM30AQ9NV96 361 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms