RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 KIF1CO43896 1103 aaKnown RBP12.66□□□□□ -0.38
MARK3-201ENST00000216288 WFS1O76024 890 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 NCF2P19878 526 aaPredicted RBP12.66□□□□□ -0.38
MARK3-201ENST00000216288 TFDP2Q14188 446 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 ZNF534Q76KX8 674 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 NME8Q8N427 588 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 PANX3Q96QZ0 392 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 PHACTR1Q9C0D0 580 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 SAR1AQ9NR31 198 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 SNTG2Q9NY99 539 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 PAK5Q9P286 719 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 STOML1Q9UBI4 398 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 ZNF112Q9UJU3 913 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 CITO14578 2027 aa12.66□□□□□ -0.38
MARK3-201ENST00000216288 POLR2AP24928 1970 aaKnown RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 PROZP22891 400 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 MGAT1P26572 445 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 VHLP40337 213 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 KLC1Q07866 573 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 USP4Q13107 963 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 DLG2Q15700 870 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 TAZQ16635 292 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 FASTKD1Q53R41 847 aaKnown RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 TCHHL1Q5QJ38 904 aaPredicted RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 N4BP2L1Q5TBK1 243 aaPredicted RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 STKLD1Q8NE28 680 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 CHST13Q8NET6 341 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 FNIP1Q8TF40 1166 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■■□□□ 12.9
MARK3-201ENST00000216288 ALKBH8Q96BT7 664 aaKnown RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 NT5C1AQ9BXI3 368 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 NRDE2Q9H7Z3 1164 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 BATF3Q9NR55 127 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 SLC7A8Q9UHI5 535 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 LNPEPQ9UIQ6 1025 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 MKI67P46013 3256 aaKnown RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 TPP1O14773 563 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 CYP2C8P10632 490 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 ARRB2P32121 409 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 CCR10P46092 362 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 POLE2P56282 527 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 PDE1BQ01064 536 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 STX3Q13277 289 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 CRLF3Q8IUI8 442 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 ENDOVQ8N8Q3 282 aaKnown RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 FBXO41Q8TF61 875 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 FGD4Q96M96 766 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 ZNF778Q96MU6 729 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 CAB39LQ9H9S4 337 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 UBP1Q9NZI7 540 aa12.65□□□□□ -0.38
MARK3-201ENST00000216288 CPSF2Q9P2I0 782 aaKnown RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 BARX2Q9UMQ3 279 aaPredicted RBP12.65□□□□□ -0.38
MARK3-201ENST00000216288 TRAFD1O14545 582 aaPredicted RBP12.65□□□□□ -0.39
MARK3-201ENST00000216288 VDRP11473 427 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 ACAT1P24752 427 aaKnown RBP12.65□□□□□ -0.39
MARK3-201ENST00000216288 SLC34A1Q06495 639 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 NME3Q13232 169 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 LPCAT4Q643R3 524 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 IZUMO2Q6UXV1 221 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 MAP7D3Q8IWC1 876 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 PNPLA1Q8N8W4 532 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 SH3TC2Q8TF17 1288 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 AFG1LQ8WV93 481 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 C12orf42Q96LP6 360 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 WDR35Q9P2L0 1181 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 GJD2Q9UKL4 321 aa12.65□□□□□ -0.39
MARK3-201ENST00000216288 RLFQ13129 1914 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 PHIPQ8WWQ0 1821 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 GOLGA8QA0A0J9YX86 632 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 GOLGA8OA6NCC3 632 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 GOLGA8NF8WBI6 632 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 CLDN5O00501 218 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 VAV1P15498 845 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 PPP1R2P3Q6NXS1 205 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 OLFML1Q6UWY5 402 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 C10orf107Q8IVU9 208 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 SCUBE1Q8IWY4 988 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 ULK2Q8IYT8 1036 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 CORO1CQ9ULV4 474 aaPredicted RBP12.64□□□□□ -0.39
MARK3-201ENST00000216288 A6NJR5 290 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 A8MXQ7 604 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 CHADO15335 359 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 SP100P23497 879 aaPredicted RBP12.64□□□□□ -0.39
MARK3-201ENST00000216288 ABCD1P33897 745 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 ENPEPQ07075 957 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 HEATR6Q6AI08 1181 aaKnown RBP12.64□□□□□ -0.39
MARK3-201ENST00000216288 RNF148Q8N7C7 305 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
MARK3-201ENST00000216288 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
MARK3-201ENST00000216288 C2orf40Q9H1Z8 148 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 TLE6Q9H808 572 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 GBA2Q9HCG7 927 aaPredicted RBP12.64□□□□□ -0.39
MARK3-201ENST00000216288 XAB2Q9HCS7 855 aaKnown RBP12.64□□□□□ -0.39
MARK3-201ENST00000216288 TNFSF13BQ9Y275 285 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 EFR3BQ9Y2G0 817 aa12.64□□□□□ -0.39
MARK3-201ENST00000216288 HBS1LQ9Y450 684 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms