RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 HOXA2O43364 376 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 EGFRP00533 1210 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 APOA4P06727 396 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 PLK1P53350 603 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 MGAT5Q09328 741 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 KIRREL3Q8IZU9 778 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 DPF3Q92784 378 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 FAM129AQ9BZQ8 928 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 FHDC1Q9C0D6 1143 aaPredicted RBP19.35■□□□□ 0.69
MBD3-201ENST00000156825 CCDC134Q9H6E4 229 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 ATP13A1Q9HD20 1204 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 RNF103O00237 685 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 ITGB5P18084 799 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 TBC1D4O60343 1298 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 UBOX5O94941 541 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 STX5Q13190 355 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 WSCD1Q658N2 575 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 MYO1HQ8N1T3 1032 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 PLEKHA8Q96JA3 519 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 C6orf203Q9P0P8 240 aaPredicted RBP19.35■□□□□ 0.69
MBD3-201ENST00000156825 NR5A2O00482 541 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 KATNA1O75449 491 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 ALOX15P16050 662 aaPredicted RBP19.34■□□□□ 0.69
MBD3-201ENST00000156825 HIST2H2ACQ16777 129 aaPredicted RBP19.34■□□□□ 0.69
MBD3-201ENST00000156825 N4BP2L1Q5TBK1 243 aaPredicted RBP19.34■□□□□ 0.69
MBD3-201ENST00000156825 HIST2H2AA3Q6FI13 130 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 CATSPERGQ6ZRH7 1159 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 ZCCHC23Q6ZST2 131 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 B3GALNT2Q8NCR0 500 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 SENP8Q96LD8 212 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 GPRC5DQ9NZD1 345 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 SELENONQ9NZV5 590 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 CCDC81Q6ZN84 652 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 C16orf59Q7L2K0 433 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 TCP10LQ8TDR4 215 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 DNAJC19Q96DA6 116 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 CNBD2Q96M20 576 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 PRPF18Q99633 342 aaKnown RBP19.34■□□□□ 0.69
MBD3-201ENST00000156825 DLGAP2Q9P1A6 1054 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 TRIM17Q9Y577 477 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 KLRC4O43908 158 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 CYP3A4P08684 503 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 SERPINF2P08697 491 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 ZNF284Q2VY69 593 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 TAF2Q6P1X5 1199 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 MKL1Q969V6 931 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 TKTL2Q9H0I9 626 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 PDE4DIPQ5VU43 2346 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 DNALI1O14645 258 aaPredicted RBP19.34■□□□□ 0.69
MBD3-201ENST00000156825 BAIAP3O94812 1187 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 DDX5P17844 614 aaKnown RBP19.34■□□□□ 0.69
MBD3-201ENST00000156825 CRADDP78560 199 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 PKN2Q16513 984 aaKnown RBP19.34■□□□□ 0.69
MBD3-201ENST00000156825 ARMC6Q6NXE6 501 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 CYB5D1Q6P9G0 228 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 SETD3Q86TU7 594 aaPredicted RBP19.34■□□□□ 0.69
MBD3-201ENST00000156825 CREG2Q8IUH2 290 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 ACOX2Q99424 681 aa19.34■□□□□ 0.69
MBD3-201ENST00000156825 DISP2A7MBM2 1401 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 F8W810 466 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 CRTAMO95727 393 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 CDH2P19022 906 aaPredicted RBP19.33■□□□□ 0.69
MBD3-201ENST00000156825 RASA2Q15283 850 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 NPNTQ6UXI9 565 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 TMC3Q7Z5M5 1100 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 ZNF614Q8N883 585 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 NETO2Q8NC67 525 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 BTN2A2Q8WVV5 523 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 SMARCD1Q96GM5 515 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 DMAP1Q9NPF5 467 aaPredicted RBP19.33■□□□□ 0.69
MBD3-201ENST00000156825 STARD3Q14849 445 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 ZNF470Q6ECI4 717 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 TRPM4Q8TD43 1214 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 DIS3LQ8TF46 1054 aaKnown RBP19.33■□□□□ 0.69
MBD3-201ENST00000156825 USP13Q92995 863 aaPredicted RBP19.33■□□□□ 0.69
MBD3-201ENST00000156825 APBA2Q99767 749 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 SNX13Q9Y5W8 968 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 KIAA1210Q9ULL0 1709 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 NFASCO94856 1347 aa19.33■□□□□ 0.69
MBD3-201ENST00000156825 BUD23O43709 281 aaKnown RBP19.33■□□□□ 0.68
MBD3-201ENST00000156825 SH3BGRLO75368 114 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 SLC6A3Q01959 620 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 EML3Q32P44 896 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 EIF3LQ9Y262 564 aaKnown RBP19.33■□□□□ 0.68
MBD3-201ENST00000156825 RIC1Q4ADV7 1423 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 ASTN1O14525 1302 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 HPCAP84074 193 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 PGS1Q32NB8 556 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 LGI2Q8N0V4 545 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 NINJ2Q9NZG7 142 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 CTNNAL1Q9UBT7 734 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 ZNF229Q9UJW7 825 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 PLA2G4CQ9UP65 541 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 SHOC2Q9UQ13 582 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 DCCP43146 1447 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 MROH7Q68CQ1 1323 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 VWDEQ8N2E2 1590 aa19.33■□□□□ 0.68
MBD3-201ENST00000156825 PDE2AO00408 941 aaPredicted RBP19.32■□□□□ 0.68
MBD3-201ENST00000156825 HSPA1AP0DMV8 641 aaKnown RBP19.32■□□□□ 0.68
MBD3-201ENST00000156825 HSPA1BP0DMV9 641 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms