RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 TSPAN1O60635 241 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 RGS20O76081 388 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 CD48P09326 243 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 ENO3P13929 434 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-201ENST00000080059 CD52P31358 61 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 MGAT5Q09328 741 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 LRRC36Q1X8D7 754 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 PMF1Q6P1K2 205 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 SLC4A11Q8NBS3 891 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 NDRG1Q92597 394 aaKnown RBP13.5□□□□□ -0.25
HDAC7-201ENST00000080059 KAT2BQ92831 832 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 BORCS6Q96GS4 357 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
HDAC7-201ENST00000080059 SUDS3Q9H7L9 328 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-201ENST00000080059 NT5MQ9NPB1 228 aa13.5□□□□□ -0.25
HDAC7-201ENST00000080059 AFF4Q9UHB7 1163 aaKnown RBP13.5□□□□□ -0.25
HDAC7-201ENST00000080059 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 FOXO6A8MYZ6 492 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SMIM24O75264 130 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ABCG1P45844 678 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SERPINB4P48594 390 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 TAF5Q15542 800 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SLC45A4Q5BKX6 768 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 XYLT1Q86Y38 959 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 USP6NLQ92738 828 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 MTBPQ96DY7 904 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 NSL1Q96IY1 281 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SRPK1Q96SB4 655 aaKnown RBP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 FIZ1Q96SL8 496 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 OR12D3Q9UGF7 316 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ZNF112Q9UJU3 913 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 STXBP5LQ9Y2K9 1186 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 NCAM2O15394 837 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ALDH1A3P47895 512 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 CRYBB1P53674 252 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ATXN3P54252 364 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 GEMP55040 296 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 HADHBP55084 474 aaKnown RBP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 DCAF12L1Q5VU92 463 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 C9orf57Q5W0N0 161 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 CALML6Q8TD86 181 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ULK4Q96C45 1275 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 IPPQ9Y573 584 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 TJP1Q07157 1748 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 C22orf31O95567 290 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 TUBP50607 506 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 AQP5P55064 265 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 MAP7Q14244 749 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 DEFB128Q7Z7B8 93 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 FICDQ9BVA6 458 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 HACD3Q9P035 362 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SCOCQ9UIL1 159 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 BAG5Q9UL15 447 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 LAMA4Q16363 1823 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 TM9SF1O15321 606 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 HOXC6P09630 235 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 FLT3LGP49771 235 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 RAB27AP51159 221 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 NBPF20Q3BBV1 942 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SLC39A12Q504Y0 691 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ANKRD20A2Q5SQ80 823 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ANKRD20A1Q5TYW2 823 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ZNF280DQ6N043 979 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 ZC3H3Q8IXZ2 948 aaKnown RBP13.49□□□□□ -0.25
HDAC7-201ENST00000080059 STKLD1Q8NE28 680 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 PIP4K2CQ8TBX8 421 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SPDL1Q96EA4 605 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 SLC30A1Q9Y6M5 507 aa13.49□□□□□ -0.25
HDAC7-201ENST00000080059 PMM2O15305 246 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 KCNA3P22001 575 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 PSMB4P28070 264 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 BRCC3P46736 316 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 EFTUD2Q15029 972 aaKnown RBP eCLIP13.48□□□□□ -0.257e-7■■■■□ 23.4
HDAC7-201ENST00000080059 RGMBQ6NW40 437 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 ZCCHC23Q6ZST2 131 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 ARRDC4Q8NCT1 418 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 ZNF75CPQ92670 426 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-201ENST00000080059 NOD2Q9HC29 1040 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 CD248Q9HCU0 757 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 SLCO1B3Q9NPD5 702 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 NDE1Q9NXR1 346 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 CDY1Q9Y6F8 540 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 TIMM44O43615 452 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 HNRNPCL1O60812 293 aaKnown RBP13.48□□□□□ -0.25
HDAC7-201ENST00000080059 DGKIO75912 1065 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 KCNA4P22459 653 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 NNMTP40261 264 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 CDKN2BP42772 138 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 AP2B1P63010 937 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 TRPV6Q9H1D0 765 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 LRRC4CQ9HCJ2 640 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 PCDH18Q9HCL0 1135 aa13.48□□□□□ -0.25
HDAC7-201ENST00000080059 PRDM4Q9UKN5 801 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms