RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ARFIP2P53365 341 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 YWHAZP63104 245 aaKnown RBP13.59□□□□□ -0.23
CTNS-201ENST00000046640 GPR162Q16538 588 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 KLHL38Q2WGJ6 581 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 TLK2Q86UE8 772 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 MCUR1Q96AQ8 359 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 PGLYRP2Q96PD5 576 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 LGMNQ99538 433 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 MECRQ9BV79 373 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 SLC13A1Q9BZW2 595 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 ZNF395Q9H8N7 513 aaPredicted RBP13.59□□□□□ -0.23
CTNS-201ENST00000046640 MYO18AQ92614 2054 aaKnown RBP13.59□□□□□ -0.23
CTNS-201ENST00000046640 PLXNA1Q9UIW2 1896 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 RARBP10826 455 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 L1CAMP32004 1257 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 NME3Q13232 169 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 SNX17Q15036 470 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 DCAF6Q58WW2 860 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 THEMIS2Q5TEJ8 643 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 KCNT2Q6UVM3 1135 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 RINLQ6ZS11 566 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 UNC5BQ8IZJ1 945 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 UCMAQ8WVF2 138 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 INPP5DQ92835 1189 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 TMEM120AQ9BXJ8 343 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 FRMD8P1Q9BZ68 369 aaPredicted RBP13.59□□□□□ -0.23
CTNS-201ENST00000046640 SEPT10Q9P0V9 454 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 TEX264Q9Y6I9 313 aa13.59□□□□□ -0.23
CTNS-201ENST00000046640 FAM237BA0A1B0GVD1 139 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 CREB3O43889 395 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 CELF2O95319 508 aaKnown RBP13.58□□□□□ -0.23
CTNS-201ENST00000046640 IRX4P78413 519 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 ADIGQ0VDE8 80 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 GRIK3Q13003 919 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 MFSD10Q14728 455 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 PDK2Q15119 407 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 IQSEC1Q6DN90 963 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 TWF2Q6IBS0 349 aaKnown RBP13.58□□□□□ -0.23
CTNS-201ENST00000046640 TRMT10BQ6PF06 316 aaKnown RBP13.58□□□□□ -0.23
CTNS-201ENST00000046640 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 CAND1Q86VP6 1230 aaKnown RBP13.58□□□□□ -0.23
CTNS-201ENST00000046640 TP53INP2Q8IXH6 220 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 APPL2Q8NEU8 664 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 FBXO41Q8TF61 875 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 DNAJC9Q8WXX5 260 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 KCTD15Q96SI1 283 aaPredicted RBP13.58□□□□□ -0.23
CTNS-201ENST00000046640 TRIM55Q9BYV6 548 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 SLC17A6Q9P2U8 582 aa13.58□□□□□ -0.23
CTNS-201ENST00000046640 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.23
CTNS-201ENST00000046640 MRPL42Q9Y6G3 142 aaKnown RBP13.58□□□□□ -0.23
CTNS-201ENST00000046640 IRX1P78414 480 aaPredicted RBP13.58□□□□□ -0.24
CTNS-201ENST00000046640 MXRA7P84157 204 aa13.58□□□□□ -0.24
CTNS-201ENST00000046640 RCN2Q14257 317 aa13.58□□□□□ -0.24
CTNS-201ENST00000046640 TMEM154Q6P9G4 183 aa13.58□□□□□ -0.24
CTNS-201ENST00000046640 ALYREFQ86V81 257 aaKnown RBP13.58□□□□□ -0.24
CTNS-201ENST00000046640 DEFB106AQ8N104 65 aa13.58□□□□□ -0.24
CTNS-201ENST00000046640 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTNS-201ENST00000046640 MZB1Q8WU39 189 aa13.58□□□□□ -0.24
CTNS-201ENST00000046640 WDR60Q8WVS4 1066 aa13.58□□□□□ -0.24
CTNS-201ENST00000046640 PLEKHA5Q9HAU0 1116 aa13.58□□□□□ -0.24
CTNS-201ENST00000046640 PAK5Q9P286 719 aa13.58□□□□□ -0.24
CTNS-201ENST00000046640 TRIP12Q14669 1992 aaPredicted RBP13.58□□□□□ -0.24
CTNS-201ENST00000046640 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 C2CD2LO14523 706 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 ZWINTO95229 277 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 BST2Q10589 180 aaKnown RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 SLC45A4Q5BKX6 768 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 CASC4Q6P4E1 433 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 C4orf50Q6ZRC1 276 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 CDHR3Q6ZTQ4 885 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 PIGZQ86VD9 579 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 OSTM1Q86WC4 334 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 LMNTD2Q8IXW0 634 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 ANKRD52Q8NB46 1076 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 ARMC2Q8NEN0 867 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 SYT15Q9BQS2 421 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 KLC2Q9H0B6 622 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 SMYD2Q9NRG4 433 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 IL1RAPL1Q9NZN1 696 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 SENP1Q9P0U3 644 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 DLGAP2Q9P1A6 1054 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 UBQLN1Q9UMX0 589 aaKnown RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 NRCAMQ92823 1304 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 TRIM49D1C9J1S8 452 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 CAPN9O14815 690 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 PLXNB2O15031 1838 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 WFS1O76024 890 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 LUC7L3O95232 432 aaKnown RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 MYL2P10916 166 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 ESRRAP11474 423 aaPredicted RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 STILQ15468 1287 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 CTC1Q2NKJ3 1217 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 ACSBG2Q5FVE4 666 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 ALKAL1Q6UXT8 129 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 NT5DC4Q86YG4 428 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 ADGRF2Q8IZF7 708 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 BANPQ8N9N5 519 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 CSPG4P5Q96PW8 444 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms