RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 QpctQ9CYK2 362 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Chrac1Q9JKP8 129 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Tubd1Q9R1K7 455 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Daw1D3Z7A5 415 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 NumblO08919 604 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Serpini1O35684 410 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 ShdO88834 343 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 HpdP49429 393 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 MipP51180 263 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Serping1P97290 504 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Rbm20Q3UQS8 1199 aaKnown RBP16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 PkdccQ5RJI4 492 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Armcx2Q6A058 784 aaKnown RBP16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ddx42Q810A7 929 aaKnown RBP16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Kirrel3Q8BR86 778 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Atg16l1Q8C0J2 607 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Hdac7Q8C2B3 938 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Dtnbp1Q91WZ8 352 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Mrps17Q9CQE3 120 aaKnown RBP16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ccdc86Q9JJ89 426 aa16.13■□□□□ 0.17
Sdc1-205ENSMUST00000171158 B020011L13RikA0A087WQI7 412 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Gm10720D3Z1I5 223 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Cyp2t4E9PWV0 503 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Hcn2O88703 863 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ets2P15037 468 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Atoh1P48985 351 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 S100bP50114 92 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Usp10P52479 792 aaKnown RBP16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Olfm3P63056 478 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Dlg3P70175 849 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Yipf3Q3UDR8 347 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Syce2Q505B8 171 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Srrm1Q52KI8 946 aaKnown RBP16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Slc26a2Q62273 739 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Arl5cQ6P068 179 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Stk40Q7TNL3 435 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Tmem260Q8BMD6 703 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Arhgap24Q8C4V1 747 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Pde6cQ91ZQ1 861 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Zfp64Q99KE8 643 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Nudt8Q9CR24 210 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Krt20Q9D312 431 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Msh5Q9QUM7 833 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Slc23a1Q9Z2J0 605 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Top3bQ9Z321 862 aaKnown RBP16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Pgk2P09041 417 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 AlplP09242 524 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Asgr1P34927 284 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Tap2P36371 702 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 CtswP56203 371 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Emilin3P59900 758 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Morf4l1P60762 362 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Sparcl1P70663 650 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Gata5P97489 404 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Stx2Q00262 289 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Pecam1Q08481 727 aaKnown RBP16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Slc16a10Q3U9N9 512 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Prmt6Q6NZB1 378 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Olfr1057Q7TR75 315 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Olfr533Q7TRT7 320 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Nudcd3Q8R1N4 363 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 PmpcbQ9CXT8 489 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Sgf29Q9DA08 293 aaKnown RBP16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Gdap2Q9DBL2 498 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Tmod3Q9JHJ0 352 aa16.12■□□□□ 0.17
Sdc1-205ENSMUST00000171158 ItgavP43406 1044 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Arl4aP61213 200 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 SnnP61807 88 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Tmprss15P97435 1069 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ccdc160Q3UYG1 323 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 PostnQ62009 838 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Scaf4Q6PFF0 1209 aaKnown RBP16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Rxfp1Q6R6I7 758 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 C6.1alQ7M757 291 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Thnsl1Q8BH55 747 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Naa25Q8BWZ3 972 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 NemfQ8CCP0 1064 aaKnown RBP16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Trim32Q8CH72 655 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Fam114a2Q8VE88 497 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Rem2Q8VEL9 341 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Bzw1Q9CQC6 419 aaKnown RBP16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Drc3Q9D5E4 523 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Krt7Q9DCV7 457 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 HemgnQ9ERZ0 503 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Acox2Q9QXD1 681 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 GghQ9Z0L8 317 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Fam81bA0A140LI28 432 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ces1bD3Z5G7 567 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Vmn1r39G3UWE6 305 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Mroh4G3X8W1 983 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Adam19O35674 920 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ccng1P51945 294 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ythdf1P59326 559 aaKnown RBP16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ksr1Q61097 873 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Prrt3Q6PE13 971 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Mis18bp1Q80WQ8 998 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Armc12Q80X86 340 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Ppp1r12bQ8BG95 976 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Klhl38Q8BSF5 581 aa16.11■□□□□ 0.17
Sdc1-205ENSMUST00000171158 Lrrc56Q8K375 552 aa16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms