RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Ndst1Q3UHN9 882 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 MyrflQ3UN70 904 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Mpzl3Q3V3F6 237 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Fam160a1Q505K2 1081 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Cyp2c66Q5GLZ0 490 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Exoc3l4Q6DIA2 721 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Lrrc8dQ8BGR2 859 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Il33Q8BVZ5 266 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Snrnp25Q8VIK1 123 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tm9sf1Q9DBU0 606 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Fads3Q9JJE7 449 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ror1Q9Z139 937 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Vmn2r104E9Q2J5 860 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 TazI7HJS2 263 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rpl10aP53026 217 aaKnown RBP15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rpl22P67984 128 aaKnown RBP15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 WhammQ571B6 793 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Dhx32Q8BZS9 744 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Olfr1352Q8VGX5 309 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Iigp1Q9QZ85 413 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rap1gds1E9Q912 607 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tmigd3G3X8R9 209 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Olfr611K7N609 323 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Olfr612L7N462 323 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rpl21O09167 160 aaKnown RBP15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Slc16a1P53986 493 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Polr1bP70700 1135 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Arid5aQ3U108 590 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Lipo3Q3UT41 399 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Bcap29Q61334 240 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tmcc1Q69ZZ6 649 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Capn11Q6J756 714 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tmco6Q8BQX5 494 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 MslnlQ8C160 685 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Dus1lQ8C2P3 475 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Pcdhb7Q8CDY9 829 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 PfkpQ9WUA3 784 aaKnown RBP15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ambra1A2AH22 1300 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Fam47eD3YWC7 402 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Gm5160F8VPN3 147 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Msh2P43247 935 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Sult1e1P49891 295 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 YwhazP63101 245 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Pitpnm3Q3UHE1 974 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Grik5Q61626 979 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Hspa1aQ61696 641 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ccdc28bQ8CEG5 200 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tmem82Q8R115 356 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Olfr532Q8VGT4 309 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Pcdhb11Q91UZ8 797 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Hdhd5Q91WM2 419 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ptdss1Q99LH2 473 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Grk2Q99MK8 689 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ap4b1Q9WV76 738 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Col4a1P02463 1669 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Nccrp1G3X9C2 266 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Scp2P32020 547 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ephx4Q6IE26 359 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Snx17Q8BVL3 470 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 P3h2Q8CG71 703 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Q8CIL4 281 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Znfx1Q8R151 1909 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Itga9B8JK39 1036 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 CenpaO35216 134 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 PrkchP23298 683 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Aldh2P47738 519 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tars2Q3UQ84 723 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rcsd1Q3UZA1 412 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Znf512Q69Z99 562 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 DgkqQ6P5E8 934 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Mapk13Q9Z1B7 366 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Cyp2t4E9PWV0 503 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 AgxtO35423 414 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 WapP01173 134 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Lamp1P11438 406 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 BtkP35991 659 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Esyt3Q5DTI8 891 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rbbp7Q60973 425 aaKnown RBP15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Olfr698Q7TRN4 311 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 B3glctQ8BHT6 489 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Zmym6Q8BS54 1249 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Il17cQ8K4C5 194 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Zfp566Q8VCI1 386 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rprd1aQ8VDS4 312 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tnip2Q99JG7 430 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ten1Q9D7K2 161 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Kcnq4Q9JK97 696 aa15.97■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tbkbp1A2A9T0 611 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ttc30a2A2AKQ8 664 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 PigrO70570 771 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Cdh16O88338 830 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 CfhP06909 1234 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 S100a9P31725 113 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ano7Q14AT5 859 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Zfp957Q3UT76 567 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Znf354cQ571J5 560 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Mxd4Q60948 209 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Soat1Q61263 540 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Zfp398Q8BV16 643 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Vwa1Q8R2Z5 415 aa15.96■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms