RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Spag4Q9JJF2 443 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm17190V9GX38 357 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm5114W4VSN8 858 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm28038F7BCN9 126 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ppt2O35448 302 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ess2O70279 479 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pdk4O70571 412 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Il10P18893 178 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Guca2aP33680 116 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Slc26a1P58735 704 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Sptlc2P97363 560 aaKnown RBP9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mageb5Q14AN0 366 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Fam107bQ3TGF2 131 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dna2Q6ZQJ5 1062 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zswim6Q80TB7 1207 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Atg4cQ811C2 458 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ttc27Q8CD92 847 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 LzicQ8K3C3 190 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nod2Q8K3Z0 1020 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rpp40Q8R1F9 363 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nr3c2Q8VII8 978 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Smc6Q924W5 1097 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dctn2Q99KJ8 402 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lpin2Q99PI5 893 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mettl18Q9CZ09 362 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tmem53Q9D0Z3 276 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 CtsrQ9JIA9 334 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Slc7a8Q9QXW9 531 aa9.4□□□□□ -0.9
Upf3b-201ENSMUST00000076265 SiglechB7ZMQ6 332 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cited2O35740 269 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Il2P04351 169 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 GhrP16882 650 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 YwhahP68510 246 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 YdjcQ14BV6 310 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Frmd8Q3UFK8 466 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tars2Q3UQ84 723 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Git1Q68FF6 770 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ppp2r2aQ6P1F6 447 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Kansl1Q80TG1 1036 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Dtx3Q80V91 347 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Q810N5 247 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 QdprQ8BVI4 241 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fam221bQ8C627 487 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sdhaf2Q8C6I2 164 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Slf1Q8R3P9 1054 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Usp15Q8R5H1 981 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr1184Q8VG86 311 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gatad2bQ8VHR5 594 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Acaa1aQ921H8 424 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 OgfrQ99PG2 633 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Arhgef25Q9CWR0 618 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ola1Q9CZ30 396 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rin2Q9D684 903 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tube1Q9D6T1 475 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 CrotQ9DC50 612 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pole3Q9JKP7 145 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mageh1Q9NWG9 218 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gpr34Q9R1K6 375 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Grin3aA2AIR5 1135 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Prpmp5E9PXN1 296 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Vmn2r96E9PZU5 664 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Adamts3E9Q287 1204 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm6526G3X9Q9 198 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ift81O35594 676 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Alox8O35936 677 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Stx8O88983 236 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Celf1P28659 486 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mbl2P41317 244 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tsc22d1P62500 1077 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ccdc138Q0VF22 680 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 DSCC1Q14AI0 399 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Spag6Q3V0U9 509 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ppp4r3cQ3V0Y1 813 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Adck2Q6NSR3 617 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tdpoz4Q6YCH2 370 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tmc3Q7TQ69 1130 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr20Q7TRX9 314 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fam92aQ8BP22 355 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 H2afy2Q8CCK0 372 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Galnt18Q8K1B9 622 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rnf113a1Q8R3P8 341 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rab7bQ8VEA8 199 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Krt79Q8VED5 531 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ing3Q8VEK6 421 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Actl6bQ99MR0 426 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nuf2Q99P69 463 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Dnaaf1Q9D2H9 634 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Clec2gQ9D676 269 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nmrk2Q9D7C9 195 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rsph3bQ9DA80 389 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Slc15a1Q9JIP7 709 aa9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 VarsQ9Z1Q9 1263 aaKnown RBP9.39□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm28897A0A087WP44 222 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tcp11x2A2AEI7 503 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm5415E9PXF3 478 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 XntrpcF8VQM8 1264 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Vwa3bJ9JI28 736 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 InvsO89019 1062 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sem1P60897 70 aa9.38□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tmprss9P69525 1065 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms