RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	SYT13	Q7L8C5	426 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	LONP2	Q86WA8	852 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	SUMF1	Q8NBK3	374 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	CLEC4C	Q8WTT0	213 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	PLD4	Q96BZ4	506 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	XPO6	Q96QU8	1125 aa	Known RBP	15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	BBS2	Q9BXC9	721 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	SLC4A5	Q9BY07	1137 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	MIS12	Q9H081	205 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	FANCL	Q9NW38	375 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	TMEM63C	Q9P1W3	806 aa		15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	HBS1L	Q9Y450	684 aa	Known RBP	15.72	■□□□□ 0.11
PHGDH-231	ENST00000641939	SART1	O43290	800 aa	Known RBP	15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	CACNG3	O60359	315 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	TULP3	O75386	442 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	TYR	P14679	529 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	CHKA	P35790	457 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	TNFRSF4	P43489	277 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	MRPS21	P82921	87 aa	Known RBP	15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	RAPGEF1	Q13905	1077 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	KRT31	Q15323	416 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	TRIP4	Q15650	581 aa	Predicted RBP	15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	C2orf27A	Q580R0	203 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	KLHDC7A	Q5VTJ3	777 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	MSANTD2	Q6P1R3	559 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	DENND1C	Q8IV53	801 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	SFTPA1	Q8IWL2	248 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	SCUBE3	Q8IX30	993 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	FAM71A	Q8IYT1	594 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	PHTF2	Q8N3S3	785 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	LSM14B	Q9BX40	385 aa	Known RBP	15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	VPS16	Q9H269	839 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	EPC1	Q9H2F5	836 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	DNAJC17	Q9NVM6	304 aa	Known RBP	15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	POLR3B	Q9NW08	1133 aa	Predicted RBP	15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	SFMBT1	Q9UHJ3	866 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	CYTH4	Q9UIA0	394 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	AGO1	Q9UL18	857 aa	Known RBP	15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	PCDHGC3	Q9UN70	934 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	RALGAPA1	Q6GYQ0	2036 aa		15.71	■□□□□ 0.11
PHGDH-231	ENST00000641939	TBC1D3B	A6NDS4	549 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	PNMA6A	P0CW24	399 aa	Predicted RBP	15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	HOXC13	P31276	330 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	CLCN1	P35523	988 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	HARS2	P49590	506 aa	Known RBP	15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	TYRO3	Q06418	890 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	DMC1	Q14565	340 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	DRAP1	Q14919	205 aa	Predicted RBP	15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	HSF5	Q4G112	596 aa	Predicted RBP	15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	GRAMD4	Q6IC98	578 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	NUDT18	Q6ZVK8	323 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	TMEM110	Q86TL2	294 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	SLC47A2	Q86VL8	602 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	WDR5B	Q86VZ2	330 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	CAMKK1	Q8N5S9	505 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	TERB1	Q8NA31	727 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	SMG5	Q9UPR3	1016 aa	Known RBP	15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	FHOD1	Q9Y613	1164 aa		15.7	■□□□□ 0.1
PHGDH-231	ENST00000641939	CCDC163	A0A0D9SF12	145 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	ANTXRL	A6NF34	631 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939		E5RJQ4	531 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	MSI1	O43347	362 aa	Known RBP	15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	NCAM1	P13591	858 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	UCHL3	P15374	230 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	CNR2	P34972	360 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	KRT9	P35527	623 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	KIR2DL1	P43626	348 aa	Predicted RBP	15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	PXN	P49023	591 aa	Predicted RBP	15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	BPIFB4	P59827	614 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	PDCL	Q13371	301 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	FKBP15	Q5T1M5	1219 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	PASD1	Q8IV76	773 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	CPXM2	Q8N436	756 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	ANKRD20A12P	Q8NF67	263 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	BHMT	Q93088	406 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	FAM149B1	Q96BN6	582 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	HHIP	Q96QV1	700 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	NAA15	Q9BXJ9	866 aa	Known RBP	15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	NAT10	Q9H0A0	1025 aa	Known RBP	15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	LHX5	Q9H2C1	402 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	PLCB1	Q9NQ66	1216 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	PLK2	Q9NYY3	685 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	MMP17	Q9ULZ9	603 aa		15.69	■□□□□ 0.1
PHGDH-231	ENST00000641939	TRIM24	O15164	1050 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	PAPSS1	O43252	624 aa	Predicted RBP	15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	HR	O43593	1189 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	APBB3	O95704	486 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	PENK	P01210	267 aa	Predicted RBP	15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	CYBB	P04839	570 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	FYN	P06241	537 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	CHRM1	P11229	460 aa	Predicted RBP	15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	TIE1	P35590	1138 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	COPB1	P53618	953 aa	Known RBP	15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	C10orf76	Q5T2E6	689 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	FYB2	Q5VWT5	728 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	CAVIN1	Q6NZI2	390 aa	Known RBP	15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	BEND5	Q7L4P6	421 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	FAM217A	Q8IXS0	508 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	WDTC1	Q8N5D0	677 aa		15.68	■□□□□ 0.1
PHGDH-231	ENST00000641939	CCDC33	Q8N5R6	958 aa		15.68	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms