RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 SLC7A5Q01650 507 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 TCF15Q12870 199 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 IFRD2Q12894 506 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 KLF1Q13351 362 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 SMAD4Q13485 552 aaKnown RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 CYP1B1Q16678 543 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 DDR2Q16832 855 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 SDHAF4Q5VUM1 108 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 OTUD1Q5VV17 481 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 SYPL2Q5VXT5 272 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 KAZNQ674X7 775 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 SLC8B1Q6J4K2 584 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 FBXL6Q8N531 539 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 FIBCD1Q8N539 461 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 TTC9BQ8N6N2 239 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 SPPL2BQ8TCT7 592 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 C2orf15Q8WU43 125 aaKnown RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 TEKT4Q8WW24 435 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 NT5C3BQ969T7 300 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 MAGOHBQ96A72 148 aaKnown RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 AAASQ9NRG9 546 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 FAM86C1Q9NVL1 165 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 DMGDHQ9UI17 866 aaKnown RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 RAB21Q9UL25 225 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 SLC27A5Q9Y2P5 690 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 PTPRDP23468 1912 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 SPTBN4Q9H254 2564 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 TECTAO75443 2155 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 M0QYT0 321 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 C2CD2LO14523 706 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 ZMYND10O75800 440 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 ENDOD1O94919 500 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 TJP3O95049 919 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 CD48P09326 243 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 NCAM1P13591 858 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 RPL17P18621 184 aaKnown RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 MCM3P25205 808 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 OR1D2P34982 312 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 PPM1AP35813 382 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 ARSEP51690 589 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 VSNL1P62760 191 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 PITX1P78337 314 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 ROR1Q01973 937 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 DSG1Q02413 1049 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 TAZQ16635 292 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 MGAT5BQ3V5L5 792 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 TFDP3Q5H9I0 405 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 BSPRYQ5W0U4 402 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 WDR93Q6P2C0 686 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 FBXO38Q6PIJ6 1188 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 BNIPLQ7Z465 357 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 DDX53Q86TM3 631 aaKnown RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 NUP93Q8N1F7 819 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 C12orf50Q8NA57 414 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 SLC7A14Q8TBB6 771 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 C1orf54Q8WWF1 131 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 EDEM1Q92611 657 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 RUBCNQ92622 972 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 ATOH1Q92858 354 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 SEPT5Q99719 369 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 SNRNP25Q9BV90 132 aaKnown RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 TRIM62Q9BVG3 475 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 CRISPLD1Q9H336 500 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 PLEKHA4Q9H4M7 779 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 ARGLU1Q9NWB6 273 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-221ENST00000641573 GPATCH2LQ9NWQ4 482 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 RRN3Q9NYV6 651 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 CALCOCO1Q9P1Z2 691 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 STIM2Q9P246 746 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 AMACRQ9UHK6 382 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 PCDHB12Q9Y5F1 795 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 C5orf42Q9H799 3197 aa13.64□□□□□ -0.23
PHGDH-221ENST00000641573 WDR27A2RRH5 827 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 MDM4O15151 490 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 SOAT2O75908 522 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 HEXIM1O94992 359 aaKnown RBP13.63□□□□□ -0.23
PHGDH-221ENST00000641573 LINC00271P0C7V0 271 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 CTNNB1P35222 781 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 RDXP35241 583 aaKnown RBP13.63□□□□□ -0.23
PHGDH-221ENST00000641573 LTBRP36941 435 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 COILP38432 576 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-221ENST00000641573 CDH6P55285 790 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
PHGDH-221ENST00000641573 DR1Q01658 176 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 DEUP1Q05D60 604 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 ADCY2Q08462 1091 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 DUSP4Q13115 394 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 KRT81Q14533 505 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 BRD3Q15059 726 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 PDK2Q15119 407 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 CA9Q16790 459 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 ZC3H12AQ5D1E8 599 aaKnown RBP13.63□□□□□ -0.23
PHGDH-221ENST00000641573 ERMARDQ5T6L9 678 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 TTC27Q6P3X3 843 aa13.63□□□□□ -0.23
PHGDH-221ENST00000641573 BEND5Q7L4P6 421 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms