RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ARCQ7LC44 396 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 STRADAQ7RTN6 431 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 FAM131BQ86XD5 332 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 C7orf61Q8IZ16 206 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 CMASQ8NFW8 434 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 SCAMP5Q8TAC9 235 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 ADAM32Q8TC27 787 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 BCL7CQ8WUZ0 217 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 IRGQQ8WZA9 623 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 RNF34Q969K3 372 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 CENPTQ96BT3 561 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 PGM2Q96G03 612 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 TMEM169Q96HH4 297 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 FUBP3Q96I24 572 aaKnown RBP eCLIP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 SLC2A13Q96QE2 648 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 YME1L1Q96TA2 773 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 FMO2Q99518 471 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 SEPT5Q99719 369 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 ZBED2Q9BTP6 218 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 TRIM62Q9BVG3 475 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 STMN4Q9H169 189 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 EPN3Q9H201 632 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 LRRC19Q9H756 370 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 ZDHHC18Q9NUE0 388 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 FEZ2Q9UHY8 353 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-219ENST00000641513 AP4E1Q9UPM8 1137 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 ZNF148Q9UQR1 794 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 SLC27A5Q9Y2P5 690 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 SNX24Q9Y343 169 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 NUP205Q92621 2012 aa9.21□□□□□ -0.94
PHGDH-219ENST00000641513 C3orf70A6NLC5 250 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 BAIAP3O94812 1187 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 KRT14P02533 472 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 FGBP02675 491 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 RPL17P18621 184 aaKnown RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 LAG3P18627 525 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 MDH1P40925 334 aaKnown RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 MAGEA9P43362 315 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 VPS41P49754 854 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 SLC5A3P53794 718 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 YWHAGP61981 247 aaKnown RBP eCLIP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 PITX1P78337 314 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 LMNB2Q03252 620 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 ADCY2Q08462 1091 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 ZNF844Q08AG5 666 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 KLF1Q13351 362 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 DPYSL3Q14195 570 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 MRPL58Q14197 206 aaKnown RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 SLMAPQ14BN4 828 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 TRADDQ15628 312 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 TRIP13Q15645 432 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 CA9Q16790 459 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 DDR2Q16832 855 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 CEP85LQ5SZL2 805 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 BSPRYQ5W0U4 402 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 C1orf228Q6PIY5 440 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 VSTM1Q6UX27 236 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 RNF19BQ6ZMZ0 732 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 CEP128Q6ZU80 1094 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 ZNF365Q70YC5 407 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 CMTR2Q8IYT2 770 aaKnown RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 NUP93Q8N1F7 819 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 CCDC185Q8N715 623 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 ATAD1Q8NBU5 361 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 STKLD1Q8NE28 680 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 ATL2Q8NHH9 583 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 SPPL2BQ8TCT7 592 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 GPR152Q8TDT2 470 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 CENPIQ92674 756 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 BADQ92934 168 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 TLCD1Q96CP7 247 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 VWCEQ96DN2 955 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 IGSF21Q96ID5 467 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 NPY6RQ99463 290 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 OXCT2Q9BYC2 517 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 PABPC3Q9H361 631 aaKnown RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 PCDH18Q9HCL0 1135 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 PNPLA8Q9NP80 782 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 DDIT4Q9NX09 232 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 RRN3Q9NYV6 651 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 SPG21Q9NZD8 308 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 MTRF1LQ9UGC7 380 aaKnown RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 ASIC3Q9UHC3 531 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 SLC12A6Q9UHW9 1150 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 CDY1Q9Y6F8 540 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 MRPL42Q9Y6G3 142 aaKnown RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 ANAPC1Q9H1A4 1944 aa9.2□□□□□ -0.94
PHGDH-219ENST00000641513 MTCL1Q9Y4B5 1905 aaKnown RBP9.2□□□□□ -0.94
PHGDH-219ENST00000641513 OBSL1O75147 1896 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 DENND4CQ5VZ89 1909 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 MTMR11A4FU01 709 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 SGK1O00141 431 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 NDC80O14777 642 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 APOL1O14791 398 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 MDM4O15151 490 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 LIASO43766 372 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 SOAT2O75908 522 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 FAM107AO95990 144 aa9.19□□□□□ -0.94
PHGDH-219ENST00000641513 FYNP06241 537 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms