RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 AKAP5P24588 427 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 BMP8BP34820 402 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 PGM1P36871 562 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 STX1BP61266 288 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 BYSLQ13895 437 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 DSC3Q14574 896 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CEP78Q5JTW2 689 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TMEM240Q5SV17 173 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 H2AFVQ71UI9 128 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 PDZD4Q76G19 769 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 PEX5LQ8IYB4 626 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 ADGRF2Q8IZF7 708 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TUBGCP3Q96CW5 907 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 MED15Q96RN5 788 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 HINFPQ9BQA5 517 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 SYT15Q9BQS2 421 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 LSM7Q9UK45 103 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 MYH9P35579 1960 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 SRRM3A6NNA2 597 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 TGFB1I1O43294 461 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 AKAP3O75969 853 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 KPNA1P52294 538 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 POLR2FP61218 127 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 SMAD3P84022 425 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 TAP1Q03518 808 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 EHHADHQ08426 723 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TRIM71Q2Q1W2 868 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 ATAT1Q5SQI0 421 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 DHX40Q8IX18 779 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 UHMK1Q8TAS1 419 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 RBM41Q96IZ5 413 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 CCDC28BQ9BUN5 200 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 SLITRK6Q9H5Y7 841 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 DCLRE1BQ9H816 532 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 DNAAF2Q9NVR5 837 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 EMC3Q9P0I2 261 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CNTN3Q9P232 1028 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 SMCHD1A6NHR9 2005 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 ADAMTS3O15072 1205 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 B4GALT5O43286 388 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 EDIL3O43854 480 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 CLASP2O75122 1294 aaKnown RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 DDHD2O94830 711 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 MOCS3O95396 460 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 NDUFV1P49821 464 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 GLRA4Q5JXX5 417 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 TMEM174Q8WUU8 243 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ACSF2Q96CM8 615 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 CHAMP1Q96JM3 812 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ZBTB45Q96K62 511 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 NLRC4Q9NPP4 1024 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 MRGBPQ9NV56 204 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 STMN3Q9NZ72 180 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 LMCD1Q9NZU5 365 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 GRIN2DO15399 1336 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ANKRD63C9JTQ0 380 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 CRCPO75575 148 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 PMS2P54278 862 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 DR1Q01658 176 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 CUL2Q13617 745 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 PPM1LQ5SGD2 360 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 FUKQ8N0W3 1084 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 SLC35C1Q96A29 364 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 NMD3Q96D46 503 aaKnown RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 NECTIN4Q96NY8 510 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 WDR24Q96S15 920 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 MTMR12Q9C0I1 747 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 KCTD10Q9H3F6 313 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 TRPM5Q9NZQ8 1165 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 FBXL5Q9UKA1 691 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 PCDHA13Q9Y5I0 950 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ARL5CA6NH57 179 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 CASTOR2A6NHX0 329 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 LRRC10BA6NIK2 292 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ASS1P00966 412 aaKnown RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 ALOX15P16050 662 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 MTHFRP42898 656 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 BCAT1P54687 386 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 PLTPP55058 493 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ADCY1Q08828 1119 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 HADHQ16836 314 aaKnown RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 SLC10A6Q3KNW5 377 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 FSCBQ5H9T9 825 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 GET4Q7L5D6 327 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 GPR141Q7Z602 305 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 DDX42Q86XP3 938 aaKnown RBP eCLIP5.87□□□□□ -1.47
RTTN-218ENST00000640408 TMEM192Q8IY95 271 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 HDAC7Q8WUI4 952 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 SYN2Q92777 582 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 RNF34Q969K3 372 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 C18orf25Q96B23 403 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 FAM149B1Q96BN6 582 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 PRMT1Q99873 361 aaKnown RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 NHEJ1Q9H9Q4 299 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 ADGRG1Q9Y653 693 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 COMMD10Q9Y6G5 202 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 TRIOBPQ9H2D6 2365 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.87□□□□□ -1.47
RTTN-218ENST00000640408 SLC2A3P11169 496 aa5.87□□□□□ -1.47
RTTN-218ENST00000640408 CHN1P15882 459 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms