RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 HCRTO43612 131 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 SORBS2O94875 1100 aaKnown RBP17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 SLC25A3Q00325 362 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 OCRLQ01968 901 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 AMHR2Q16671 573 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 FAM47CQ5HY64 1035 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 C1orf146Q5VVC0 180 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 ATG16L1Q676U5 607 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 ACOT1Q86TX2 421 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 RSPH3Q86UC2 560 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 MAP7D3Q8IWC1 876 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 HIPK4Q8NE63 616 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 SH3TC2Q8TF17 1288 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 CLEC4CQ8WTT0 213 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 KLRG1Q96E93 195 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 TSC22D3Q99576 134 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 GPR20Q99678 358 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 CXCL16Q9H2A7 254 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 DHX35Q9H5Z1 703 aaKnown RBP17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 KCNK4Q9NYG8 393 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 CAPN14A8MX76 684 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 SPECC1L-ADORA2AF8WAN1 911 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 ENDOD1O94919 500 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 YBX3P16989 372 aaKnown RBP eCLIP17.12■□□□□ 0.331e-13■■□□□ 14.4
HNRNPU-228ENST00000640306 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 SLC10A2Q12908 348 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 PEX6Q13608 980 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 LGSNQ5TDP6 509 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 DENND5BQ6ZUT9 1274 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 ULK2Q8IYT8 1036 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 FZD8Q9H461 694 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 GPRC5DQ9NZD1 345 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 SLC7A8Q9UHI5 535 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 A0A087WZ62 844 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 ARHGAP42A6NI28 874 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 SPAG6O75602 509 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 KRT38O76015 456 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 C6orf222P0C671 652 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 TSHRP16473 764 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 STX3Q13277 289 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 TEX44Q53QW1 395 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 PPP1R26Q5T8A7 1209 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 TMPRSS6Q8IU80 811 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 ADGRF2Q8IZF7 708 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 STKLD1Q8NE28 680 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 KCNN1Q92952 543 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 CCDC124Q96CT7 223 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 FDXACB1Q9BRP7 624 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 WWP1Q9H0M0 922 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 C2orf40Q9H1Z8 148 aa17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 SPATS2LQ9NUQ6 558 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 HBS1LQ9Y450 684 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-228ENST00000640306 EVPLQ92817 2033 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 LCTP09848 1927 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 VTNP04004 478 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 VDRP11473 427 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 GNAT1P11488 350 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 GABRB2P47870 512 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 SESN2P58004 480 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 CES3Q6UWW8 571 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 ZNF534Q76KX8 674 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 CCNJLQ8IV13 435 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 GSTCDQ8NEC7 633 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 CHST13Q8NET6 341 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 RNPEPQ9H4A4 650 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 CYP4F11Q9HBI6 524 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 RNF181Q9P0P0 153 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 ZNF112Q9UJU3 913 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 PPM1HQ9ULR3 514 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 WDR27A2RRH5 827 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 PPP1R12AO14974 1030 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 PFKMP08237 780 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 CYP2F1P24903 491 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 SDC4P31431 198 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 EPHB1P54762 984 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 SLC10A6Q3KNW5 377 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 IZUMO2Q6UXV1 221 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 ARHGAP24Q8N264 748 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 ATXN7L3BQ96GX2 97 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 SIGLEC10Q96LC7 697 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 C7orf26Q96N11 449 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 SIRPGQ9P1W8 387 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 SCOCQ9UIL1 159 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 MAGED2Q9UNF1 606 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 GINS2Q9Y248 185 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 DNAJC16Q9Y2G8 782 aa17.11■□□□□ 0.33
HNRNPU-228ENST00000640306 CIB2O75838 187 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 BPGMP07738 259 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 PRKCHP24723 683 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 AP1B1Q10567 949 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 FASTKD1Q53R41 847 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 IRGCQ6NXR0 463 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 GADL1Q6ZQY3 521 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 FAM167AQ96KS9 214 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 TAGLN3Q9UI15 199 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 SIP14410 1827 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 PHKA2P46019 1235 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 CACNA2D1P54289 1103 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms