RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 PYCARD-AS1I3L0S3 204 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 TNFRSF10AO00220 468 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 KRT13P13646 458 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 DRD2P14416 443 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 PECAM1P16284 738 aaPredicted RBP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 HLA-DPA1P20036 260 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 PSMA4P25789 261 aaKnown RBP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 PRDX5P30044 214 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 PSMB10P40306 273 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 KCNJ4P48050 445 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 HARS2P49590 506 aaKnown RBP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 SP3Q02447 781 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 TEKQ02763 1124 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 EXOSC9Q06265 439 aaKnown RBP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 CTBP1Q13363 440 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 ANKRD1Q15327 319 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 SEC23BQ15437 767 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 TRIM71Q2Q1W2 868 aaKnown RBP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 C11orf88Q6PI97 169 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 TRAT1Q6PIZ9 186 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 FAM90A1Q86YD7 464 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 WDTC1Q8N5D0 677 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 IFI44Q8TCB0 444 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 BICD2Q8TD16 824 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 TRIM44Q96DX7 344 aaPredicted RBP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 PGAP3Q96FM1 320 aaPredicted RBP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 RUNDC3BQ96NL0 473 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 GBP4Q96PP9 640 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 PSMG3-AS1Q96PY0 264 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 ATP6V0BQ99437 205 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 FUZQ9BT04 418 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 WDCPQ9H6R7 721 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 SNX15Q9NRS6 342 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 AP5S1Q9NUS5 200 aa7.83□□□□□ -1.16
NECAP1-220ENST00000639841 ZMYND8Q9ULU4 1186 aaPredicted RBP7.83□□□□□ -1.16
NECAP1-220ENST00000639841 FAM171A2A8MVW0 826 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 E7EVH7 732 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 TAF4O00268 1085 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 PES1O00541 588 aaKnown RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 KINO60870 393 aaKnown RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 CKBP12277 381 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 MAPK3P27361 379 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 GCH1P30793 250 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 SLC12A3P55017 1021 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 HMGN5P82970 282 aaKnown RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 SMAD4Q13485 552 aaKnown RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ZNF805Q5CZA5 627 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 DYMQ7RTS9 669 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ZNF655Q8N720 491 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 CCDC150Q8NCX0 1101 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 DEPDC1BQ8WUY9 529 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 C1orf43Q9BWL3 253 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 JPH1Q9HDC5 661 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 PLA2G3Q9NZ20 509 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 STARD13Q9Y3M8 1113 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 CCL27Q9Y4X3 112 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 X6R8D5 127 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ARAP2Q8WZ64 1704 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 A0A1W2PPC1 479 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 PRAMEF25A6NGN4 478 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 NPIPB15A6NHN6 443 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 TGFB1I1O43294 461 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 TXNL1O43396 289 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 TBC1D4O60343 1298 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 PPP1R11O60927 126 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ENTPD3O75355 529 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ZNF853P0CG23 659 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 TXNP10599 105 aaKnown RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 CYP2A6P11509 494 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 PTPN2P17706 415 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 KLRK1P26718 216 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 PSMC2P35998 433 aaKnown RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 EPHA5P54756 1037 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ATP8B2P98198 1209 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 NAA25Q14CX7 972 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 BTBD16Q32M84 506 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 TTC22Q5TAA0 569 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 DEPDC1Q5TB30 811 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 C16orf87Q6PH81 154 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 SLC51AQ86UW1 340 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ANKRD35Q8N283 1001 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 TDRD5Q8NAT2 981 aaKnown RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ZBTB44Q8NCP5 570 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 GAB3Q8WWW8 586 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 CHFRQ96EP1 664 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 PERPQ96FX8 193 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ALPK1Q96QP1 1244 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 PHF7Q9BWX1 381 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ZNF518BQ9C0D4 1074 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 DEFB129Q9H1M3 183 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 COPS7BQ9H9Q2 264 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-220ENST00000639841 RIC8BQ9NVN3 520 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 HCFC1R1Q9NWW0 138 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ARHGAP20Q9P2F6 1191 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 LYVE1Q9Y5Y7 322 aa7.82□□□□□ -1.16
NECAP1-220ENST00000639841 ASTN2O75129 1339 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-220ENST00000639841 SPEF2Q9C093 1822 aa7.81□□□□□ -1.16
NECAP1-220ENST00000639841 HNRNPRO43390 633 aaKnown RBP7.81□□□□□ -1.16
NECAP1-220ENST00000639841 SEC22BO75396 215 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms