RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 SLC2A14Q8TDB8 520 aa19.6■□□□□ 0.73
CROCCP2-206ENST00000639594 DNAJB3Q8WWF6 145 aa19.6■□□□□ 0.73
CROCCP2-206ENST00000639594 SNX25Q9H3E2 840 aa19.6■□□□□ 0.73
CROCCP2-206ENST00000639594 SMYD2Q9NRG4 433 aa19.6■□□□□ 0.73
CROCCP2-206ENST00000639594 HAO1Q9UJM8 370 aa19.6■□□□□ 0.73
CROCCP2-206ENST00000639594 PIN4Q9Y237 131 aaKnown RBP19.6■□□□□ 0.73
CROCCP2-206ENST00000639594 MFHAS1Q9Y4C4 1052 aa19.6■□□□□ 0.73
CROCCP2-206ENST00000639594 TRIM49D1C9J1S8 452 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 GCATO75600 419 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 SOX4Q06945 474 aaPredicted RBP19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 NLRP9Q7RTR0 991 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 SAPCD2Q86UD0 394 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 LRRC6Q86X45 466 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 PYROXD2Q8N2H3 581 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 MCUQ8NE86 351 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 NDRG1Q92597 394 aaKnown RBP19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 CSPG4P5Q96PW8 444 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 TRIM56Q9BRZ2 755 aaKnown RBP19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 KANSL3Q9P2N6 904 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 NR2E3Q9Y5X4 410 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 MBLAC1A4D2B0 266 aaPredicted RBP19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 C2CD2LO14523 706 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 UGT1A9O60656 530 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 F2P00734 622 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 CD4P01730 458 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 T-ENOLP0DO92 83 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 AMPD1P23109 780 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 ARCQ7LC44 396 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 VPS52Q8N1B4 723 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 MPP5Q8N3R9 675 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 AGAP11Q8TF27 550 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 UTP4Q969X6 686 aaKnown RBP19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 TTC17Q96AE7 1141 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 LENG1Q96BZ8 264 aaPredicted RBP19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 SIGLEC10Q96LC7 697 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 TMEM237Q96Q45 408 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 UGT1A7Q9HAW7 530 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 UGT1A10Q9HAW8 530 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 UGT1A8Q9HAW9 530 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 GDAP2Q9NXN4 497 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 SLC5A4Q9NY91 659 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 DCTN4Q9UJW0 460 aa19.59■□□□□ 0.73
CROCCP2-206ENST00000639594 TRDMT1O14717 391 aaKnown RBP19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 ATP5HO75947 161 aa19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 ZFXP17010 805 aaPredicted RBP19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 IBSPP21815 317 aaPredicted RBP19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 PRKCHP24723 683 aa19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 TKTP29401 623 aaKnown RBP19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 SCNN1AP37088 669 aa19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 MAGEA3P43357 314 aa19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 NCBP2-AS2Q69YL0 99 aa19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 C4orf22Q6V702 233 aa19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 UNC5AQ6ZN44 842 aa19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 QKIQ96PU8 341 aaKnown RBP eCLIP19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 PARK7Q99497 189 aaKnown RBP19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 NUMBLQ9Y6R0 609 aa19.58■□□□□ 0.72
CROCCP2-206ENST00000639594 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 APOEP02649 317 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 TROVE2P10155 538 aaKnown RBP eCLIP19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 GOT1P17174 413 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 ACADSBP45954 432 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 NR2C2P49116 596 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 SNX17Q15036 470 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 UBXN11Q5T124 520 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 CDHR3Q6ZTQ4 885 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 CHSY1Q86X52 802 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 APPL2Q8NEU8 664 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 ZNF560Q96MR9 790 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 TSSK1BQ9BXA7 367 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 DTLQ9NZJ0 730 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 GTF2IRD1Q9UHL9 959 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 ZNF236Q9UL36 1845 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 SNRPAP09012 282 aaKnown RBP19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 BGNP21810 368 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 AXLP30530 894 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 GRIA1P42261 906 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 TAF6P49848 677 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 MFSD10Q14728 455 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 PCBP1Q15365 356 aaKnown RBP eCLIP19.57■□□□□ 0.721e-17■■■□□ 14.9
CROCCP2-206ENST00000639594 TAF1BQ53T94 588 aaPredicted RBP19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 OSTM1Q86WC4 334 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 ZNF398Q8TD17 642 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 LRRC39Q96DD0 335 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 LRMDAQ9H2I8 198 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 ZNF180Q9UJW8 692 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 GNEQ9Y223 722 aaKnown RBP19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 L3MBTL1Q9Y468 752 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 USP3Q9Y6I4 520 aa19.57■□□□□ 0.72
CROCCP2-206ENST00000639594 COPEO14579 308 aa19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 TPSB2P20231 275 aa19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 TPSAB1Q15661 275 aa19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 XKR4Q5GH76 650 aa19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 ZNF449Q6P9G9 518 aa19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 TRMT10BQ6PF06 316 aaKnown RBP19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 STRADAQ7RTN6 431 aa19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 MTDHQ86UE4 582 aaKnown RBP19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 FAM131BQ86XD5 332 aa19.56■□□□□ 0.72
CROCCP2-206ENST00000639594 DEFB106AQ8N104 65 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms