RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CETN3O15182 167 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 AP5Z1O43299 807 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 NDUFV2P19404 249 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 RAD23BP54727 409 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 ZNF252P-AS1Q0IIN9 211 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 EFEMP1Q12805 493 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 LMAN2Q12907 356 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 PNOCQ13519 176 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 UAP1L1Q3KQV9 507 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 PEAR1Q5VY43 1037 aaPredicted RBP17.71■□□□□ 0.43
SMN2-216ENST00000638794 SDE2Q6IQ49 451 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 PIGZQ86VD9 579 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 TTC39CQ8N584 583 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 DEFB119Q8N690 84 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 TATDN2Q93075 761 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 TMEM176AQ96HP8 235 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 CDK5RAP1Q96SZ6 601 aaKnown RBP17.71■□□□□ 0.43
SMN2-216ENST00000638794 CACNA2D2Q9NY47 1150 aa17.71■□□□□ 0.43
SMN2-216ENST00000638794 IGHV1OR15-9A0A0B4J2B8 117 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 STX10O60499 249 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 HMBSP08397 361 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 ENGP17813 658 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 CORO1AP31146 461 aaKnown RBP17.7■□□□□ 0.42
SMN2-216ENST00000638794 DPP6P42658 865 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 MAPK8P45983 427 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 COG7P83436 770 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 ARHGAP17Q68EM7 881 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 SLC23A3Q6PIS1 610 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 SLC36A4Q6YBV0 504 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 SLC6A17Q9H1V8 727 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 FBXO10Q9UK96 956 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 CYP8B1Q9UNU6 501 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 ZNF510Q9Y2H8 683 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 PCDH15Q96QU1 1955 aa17.7■□□□□ 0.42
SMN2-216ENST00000638794 WASH3PC4AMC7 463 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 ZBTB24O43167 697 aaPredicted RBP17.69■□□□□ 0.42
SMN2-216ENST00000638794 PENKP01210 267 aaPredicted RBP17.69■□□□□ 0.42
SMN2-216ENST00000638794 CEACAM1P13688 526 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 CSRP1P21291 193 aaKnown RBP17.69■□□□□ 0.42
SMN2-216ENST00000638794 HOXD12P35452 270 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 PRCPP42785 496 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 CBWD6Q4V339 395 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 DCAF17Q5H9S7 520 aaPredicted RBP17.69■□□□□ 0.42
SMN2-216ENST00000638794 RAB41Q5JT25 222 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 CBWD3Q5JTY5 395 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 CBWD5Q5RIA9 395 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 TCERG1LQ5VWI1 586 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 FYB2Q5VWT5 728 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 CCDC34Q96HJ3 373 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 UBXN6Q9BZV1 441 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 CD93Q9NPY3 652 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 FSCN3Q9NQT6 498 aa17.69■□□□□ 0.42
SMN2-216ENST00000638794 TULP2O00295 520 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 GFRA2O00451 464 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 ZNF217O75362 1048 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 CFIP05156 583 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 CHKAP35790 457 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 MFAP3P55082 362 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 YWHAGP61981 247 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMN2-216ENST00000638794 ZNF33AQ06730 810 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 CACNA1EQ15878 2313 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 RSRC2Q7L4I2 434 aaKnown RBP17.68■□□□□ 0.42
SMN2-216ENST00000638794 SLC41A1Q8IVJ1 513 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 FMR1NBQ8N0W7 255 aaPredicted RBP17.68■□□□□ 0.42
SMN2-216ENST00000638794 ARHGAP18Q8N392 663 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 ANKRD52Q8NB46 1076 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 DEFB124Q8NES8 71 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 MRGPRX1Q96LB2 322 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 DCLK3Q9C098 648 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 FAM124BQ9H5Z6 455 aaPredicted RBP17.68■□□□□ 0.42
SMN2-216ENST00000638794 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 MARCH2Q9P0N8 246 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 AGO1Q9UL18 857 aaKnown RBP17.68■□□□□ 0.42
SMN2-216ENST00000638794 SLC27A6Q9Y2P4 619 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 PCNX2A6NKB5 2137 aa17.68■□□□□ 0.42
SMN2-216ENST00000638794 SPEGQ15772 3267 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 SLC16A3O15427 465 aaKnown RBP17.67■□□□□ 0.42
SMN2-216ENST00000638794 TKTL1P51854 596 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 PMS1P54277 932 aaKnown RBP17.67■□□□□ 0.42
SMN2-216ENST00000638794 SLC8A3P57103 927 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 FOXC1Q12948 553 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 CUL2Q13617 745 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 GEN1Q17RS7 908 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 DUOXA1Q1HG43 343 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 GOLGA7BQ2TAP0 167 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 ZNF658Q5TYW1 1059 aaPredicted RBP17.67■□□□□ 0.42
SMN2-216ENST00000638794 DENND1CQ8IV53 801 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 ZC3H3Q8IXZ2 948 aaKnown RBP17.67■□□□□ 0.42
SMN2-216ENST00000638794 CEP76Q8TAP6 659 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 TSG101Q99816 390 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 TSPAN16Q9UKR8 245 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 STRIP2Q9ULQ0 834 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 SLC6A14Q9UN76 642 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 COQ4Q9Y3A0 265 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 STON1Q9Y6Q2 735 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 CKAP5Q14008 2032 aa17.67■□□□□ 0.42
SMN2-216ENST00000638794 SLC12A8A0AV02 714 aa17.66■□□□□ 0.42
SMN2-216ENST00000638794 ZBED1O96006 694 aa17.66■□□□□ 0.42
SMN2-216ENST00000638794 PDE4CQ08493 712 aa17.66■□□□□ 0.42
SMN2-216ENST00000638794 COBLL1Q53SF7 1204 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms