RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CHRNDQ07001 517 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 AKAP14Q86UN6 197 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 PHACTR4Q8IZ21 702 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 EPB41L4AQ9HCS5 686 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 PIK3CGP48736 1102 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 AMPD2Q01433 879 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 INTS11Q5TA45 600 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 MAGEB10Q96LZ2 347 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 ZCCHC2Q9C0B9 1178 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 JPH1Q9HDC5 661 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 CCDC154A6NI56 674 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 GRSF1Q12849 480 aaKnown RBP eCLIP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 FOXP4Q8IVH2 680 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 C4orf33Q8N1A6 199 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 TEX13BQ9BXU2 312 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 ISCUQ9H1K1 167 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 R3HDM2Q9Y2K5 976 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 ADD2P35612 726 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 MEIOBQ8N635 442 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 ZNF341Q9BYN7 854 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 NDUFB9Q9Y6M9 179 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 ARF3P61204 181 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 ARF1P84077 181 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 TUBA3EQ6PEY2 450 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 NT5C1AQ9BXI3 368 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 RPS6KA6Q9UK32 745 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 RASGRP4Q8TDF6 673 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 XPR1Q9UBH6 696 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 DBR1Q9UK59 544 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 WASHC2DQ5SRD0 308 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 IZUMO2Q6UXV1 221 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 REEP1Q9H902 201 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 DHFRP00374 187 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 SLC44A2Q8IWA5 706 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 BSNDQ8WZ55 320 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 PIGSQ96S52 555 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 OSBPL11Q9BXB4 747 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 PDXKO00764 312 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 TDRD5Q8NAT2 981 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 B3GALNT2Q8NCR0 500 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 C1QTNF7Q9BXJ2 289 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 ST3GAL5Q9UNP4 418 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 SLC15A2Q16348 729 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 TBCELQ5QJ74 424 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 ZCWPW1Q9H0M4 648 aa19.84■□□□□ 0.77
CACNA1A-257ENST00000638009 LRRIQ1Q96JM4 1722 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 LOC100506127A0A0U1RQW1 187 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 PGBD2Q6P3X8 592 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 TRIM66O15016 1216 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 FARP2O94887 1054 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 PGK1P00558 417 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 ABATP80404 500 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 NACC2Q96BF6 587 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 CCDC115Q96NT0 180 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 EURLQ9NYK6 297 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 DDHD2O94830 711 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 ARL3P36405 182 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 TCEA2Q15560 299 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 TYSND1Q2T9J0 566 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 IPMKQ8NFU5 416 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 MAGEE2Q8TD90 523 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 GPRASP2Q96D09 838 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 NMRK2Q9NPI5 230 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 LRRC4BQ9NT99 713 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 PBRM1Q86U86 1689 aa19.83■□□□□ 0.77
CACNA1A-257ENST00000638009 USP17L3A6NCW0 530 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 USP17L4A6NCW7 530 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 GATBO75879 557 aaKnown RBP19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 KDM7AQ6ZMT4 941 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 USP17L1Q7RTZ2 530 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 LXNQ9BS40 222 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 ANKRD6Q9Y2G4 727 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 CRYL1Q9Y2S2 319 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 RGS10O43665 173 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 SUPT7LO94864 414 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 IRAK1P51617 712 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 HLA-DQA1Q5Y7H0 255 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 PDGFCQ9NRA1 345 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 HEY2Q9UBP5 337 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 TBC1D30Q9Y2I9 924 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 RBM7Q9Y580 266 aaKnown RBP19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 PTPN4P29074 926 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 MYBPC3Q14896 1274 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 RPRD1AQ96P16 312 aaPredicted RBP19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 RRN3Q9NYV6 651 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 RPS6KL1Q9Y6S9 549 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 PLB1Q6P1J6 1458 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 CDC42BPGQ6DT37 1551 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 AGMOQ6ZNB7 445 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 DAW1Q8N136 415 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 FSTL5Q8N475 847 aaPredicted RBP19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 OR6Y1Q8NGX8 325 aa19.83■□□□□ 0.76
CACNA1A-257ENST00000638009 CDH4P55283 916 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 UBXN2AP68543 259 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 USF2Q15853 346 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 NLGN1Q8N2Q7 840 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 HNRNPLLQ8WVV9 542 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 KLHL32Q96NJ5 620 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 EIF2AK2P19525 551 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 RPL3P39023 403 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms