RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CFAP36Q96G28 342 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 CSPG4P5Q96PW8 444 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 IQCGQ9H095 443 aaKnown RBP12.56□□□□□ -0.4
CLN8-212ENST00000637083 LRRC4Q9HBW1 653 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 FLRT1Q9NZU1 646 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 SPTLC1O15269 473 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 KRT38O76015 456 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 FBXO21O94952 628 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 RPLP2P05387 115 aaKnown RBP12.55□□□□□ -0.4
CLN8-212ENST00000637083 MLNP12872 115 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 NPR3P17342 541 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 PRKCHP24723 683 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 SLC8A1P32418 973 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 RGS2P41220 211 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 SERPINB9P50453 376 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 NCALDP61601 193 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 ELF3P78545 371 aaPredicted RBP12.55□□□□□ -0.4
CLN8-212ENST00000637083 MRPS5P82675 430 aaKnown RBP12.55□□□□□ -0.4
CLN8-212ENST00000637083 SLC18A2Q05940 514 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 RIPK1Q13546 671 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 HIC1Q14526 733 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
CLN8-212ENST00000637083 RSPH3Q86UC2 560 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 PIGZQ86VD9 579 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 CCNJLQ8IV13 435 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 DEFB106AQ8N104 65 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 SIX6OS1Q8N1H7 587 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 TMEM86AQ8N2M4 240 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 HTR3CQ8WXA8 447 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 KLHL29Q96CT2 875 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 LRRC37BQ96QE4 947 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 KCTD15Q96SI1 283 aaPredicted RBP12.55□□□□□ -0.4
CLN8-212ENST00000637083 FZD10Q9ULW2 581 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.41e-10■■■■■ 241.2
CLN8-212ENST00000637083 SCN1AP35498 2009 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 CYB561D2O14569 222 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 APOEP02649 317 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 NQO1P15559 274 aaKnown RBP12.55□□□□□ -0.4
CLN8-212ENST00000637083 PTPN1P18031 435 aaKnown RBP12.55□□□□□ -0.4
CLN8-212ENST00000637083 RASSF2P50749 326 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 SEMA5AQ13591 1074 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 KCNT2Q6UVM3 1135 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 CYS1Q717R9 158 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 CHSY1Q86X52 802 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 IGDCC3Q8IVU1 814 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 CTAGE3PQ8IX95 158 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 GSDMBQ8TAX9 411 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 CCDC110Q8TBZ0 833 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 CLEC4CQ8WTT0 213 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 TMEM40Q8WWA1 233 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 SOCS4Q8WXH5 440 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 FAM149B1Q96BN6 582 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 RAB3IPQ96QF0 476 aaPredicted RBP12.55□□□□□ -0.4
CLN8-212ENST00000637083 MANSC1Q9H8J5 431 aa12.55□□□□□ -0.4
CLN8-212ENST00000637083 PDCD11Q14690 1871 aaKnown RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 MANSC4A6NHS7 340 aaPredicted RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 COPEO14579 308 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 HNRNPCL1O60812 293 aaKnown RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 NEFHP12036 1026 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 CCNB1P14635 433 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 CNTFP26441 200 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 LHX1P48742 406 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 GBE1Q04446 702 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 ADIGQ0VDE8 80 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 SWT1Q5T5J6 900 aaKnown RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 NCBP2-AS2Q69YL0 99 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 TBC1D1Q86TI0 1168 aaPredicted RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 CAND1Q86VP6 1230 aaKnown RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 ECHDC2Q86YB7 292 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 SMG8Q8ND04 991 aaKnown RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 LENG1Q96BZ8 264 aaPredicted RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 SLC9A7Q96T83 725 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 EBNA1BP2Q99848 306 aaKnown RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 MED10Q9BTT4 135 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 POPDC2Q9HBU9 364 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 CHST12Q9NRB3 414 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 MTMR10Q9NXD2 777 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 RAD54BQ9Y620 910 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 A0A0A0MRY4 1105 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 IGF2BP3O00425 579 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLN8-212ENST00000637083 PPP1R12AO14974 1030 aaPredicted RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 OPHN1O60890 802 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 DGKIO75912 1065 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 FAM200BP0CF97 657 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 ADRA1DP25100 572 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 HOXC8P31273 242 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 MAGEA3P43357 314 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 ZNF135P52742 658 aaPredicted RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 NRLP54845 237 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 PDK1Q15118 436 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 TAF1CQ15572 869 aaPredicted RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 FSCN1Q16658 493 aaKnown RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 CCDC185Q8N715 623 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 RMDN2Q96LZ7 410 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 SPATA13Q96N96 652 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms