RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 FGF14Q92915 247 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 NXPE3Q969Y0 559 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 ELSPBP1Q96BH3 223 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 ARHGEF26Q96DR7 871 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 KXD1Q9BQD3 176 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 PACSIN1Q9BY11 444 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 GKN1Q9NS71 199 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 RRN3Q9NYV6 651 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 MYO1AQ9UBC5 1043 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 SFMBT1Q9UHJ3 866 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 SLC12A8A0AV02 714 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 C2CD4BA6NLJ0 364 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 HEPACAM2A8MVW5 462 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 LEFTY2O00292 366 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 IGLV3-25P01717 112 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 TMEM253P0C7T8 217 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 RFC1P35251 1148 aaPredicted RBP16.69■□□□□ 0.26
CLN6-216ENST00000636876 PITX1P78337 314 aaPredicted RBP16.69■□□□□ 0.26
CLN6-216ENST00000636876 COG7P83436 770 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 SPA17Q15506 151 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 ZNF77Q15935 545 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 DCUN1D2Q6PH85 259 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 RIN3Q8TB24 985 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 RXFP2Q8WXD0 754 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 CTNNBL1Q8WYA6 563 aaPredicted RBP16.69■□□□□ 0.26
CLN6-216ENST00000636876 NT5C3BQ969T7 300 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 SERPINB11Q96P15 392 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 MCEEQ96PE7 176 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 NPY6RQ99463 290 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 MRPL47Q9HD33 250 aaKnown RBP16.69■□□□□ 0.26
CLN6-216ENST00000636876 CFAP97Q9P2B7 532 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 INTUQ9ULD6 942 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 STAP1Q9ULZ2 295 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 HBS1LQ9Y450 684 aaKnown RBP16.69■□□□□ 0.26
CLN6-216ENST00000636876 NUMBLQ9Y6R0 609 aa16.69■□□□□ 0.26
CLN6-216ENST00000636876 MSI1O43347 362 aaKnown RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 IPO7O95373 1038 aaKnown RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 TRUB2O95900 331 aaKnown RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 PTMAP06454 111 aaKnown RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 IRF1P10914 325 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 PDGFRAP16234 1089 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 MAGEA1P43355 309 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 KPNA1P52294 538 aaPredicted RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 RPL7AP62424 266 aaKnown RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 NNTQ13423 1086 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 TRIP4Q15650 581 aaPredicted RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 SLC25A52Q3SY17 297 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 OTUD1Q5VV17 481 aaPredicted RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 VITQ6UXI7 678 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 ADAM32Q8TC27 787 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 RSAD2Q8WXG1 361 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 LRRC3BQ96PB8 259 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 PLA2G2FQ9BZM2 168 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 FAM204AQ9H8W3 233 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 KCNK12Q9HB15 430 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 LUC7LQ9NQ29 371 aaKnown RBP16.68■□□□□ 0.26
CLN6-216ENST00000636876 IGSF9Q9P2J2 1179 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 PCDHA13Q9Y5I0 950 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 MYO10Q9HD67 2058 aa16.68■□□□□ 0.26
CLN6-216ENST00000636876 TMEM191CA6NGB0 347 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 ARHGAP6O43182 974 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 IRAK2O43187 625 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 NRDCO43847 1150 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 STC2O76061 302 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 HMBSP08397 361 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 TFE3P19532 575 aaPredicted RBP16.67■□□□□ 0.26
CLN6-216ENST00000636876 GPD1P21695 349 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 SDC4P31431 198 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 PTPN9P43378 593 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 SULT1E1P49888 294 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 CCZ1BP86790 482 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 CCZ1P86791 482 aaPredicted RBP16.67■□□□□ 0.26
CLN6-216ENST00000636876 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 MFSD6LQ8IWD5 586 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 TTC16Q8NEE8 873 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 BPIFB1Q8TDL5 484 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 DEPDC1BQ8WUY9 529 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 WBP2Q969T9 261 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 PLD4Q96BZ4 506 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 PGAP3Q96FM1 320 aaPredicted RBP16.67■□□□□ 0.26
CLN6-216ENST00000636876 CFAP57Q96MR6 1250 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 TBCBQ99426 244 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 RPP25Q9BUL9 199 aaKnown RBP16.67■□□□□ 0.26
CLN6-216ENST00000636876 NUP85Q9BW27 656 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 ADAM33Q9BZ11 813 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 DDIT4Q9NX09 232 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 TLR6Q9Y2C9 796 aa16.67■□□□□ 0.26
CLN6-216ENST00000636876 REXO2Q9Y3B8 237 aaKnown RBP16.67■□□□□ 0.26
CLN6-216ENST00000636876 E2F8A0AVK6 867 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 M0QYT0 321 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 IGLV3-27P01718 113 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 ASGR2P07307 311 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 GBP1P32455 592 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 ZNF143P52747 638 aaPredicted RBP16.66■□□□□ 0.26
CLN6-216ENST00000636876 TBX4P57082 545 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 RING1Q06587 406 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 EIF4EBP2Q13542 120 aaPredicted RBP16.66■□□□□ 0.26
CLN6-216ENST00000636876 CCDC14Q49A88 953 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 KIAA1958Q8N8K9 716 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms