RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 FAM92AA1XBS5 289 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 ANTXRLA6NF34 631 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 TNFRSF10BO14763 440 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 C4BPAP04003 597 aaKnown RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 P4HA1P13674 534 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 HNRNPLP14866 589 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTSD-208ENST00000636843 BCKDHBP21953 392 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 P2RY2P41231 377 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 DHPSP49366 369 aaPredicted RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 CDH8P55286 799 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 MESP2Q0VG99 397 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 EDRF1Q3B7T1 1238 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 BTBD8Q5XKL5 378 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 PSAPL1Q6NUJ1 521 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 RAD9BQ6WBX8 426 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 PAQR9Q6ZVX9 377 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 LPCAT2Q7L5N7 544 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 MTERF4Q7Z6M4 381 aaKnown RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 C12orf40Q86WS4 652 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 TTC30AQ86WT1 665 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 ZC3H3Q8IXZ2 948 aaKnown RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 ZNF397Q8NF99 534 aaPredicted RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 KCNV2Q8TDN2 545 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 TMEM174Q8WUU8 243 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 KCNK16Q96T55 309 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 NDST4Q9H3R1 872 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 L2HGDHQ9H9P8 463 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 TMEM9BQ9NQ34 198 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 LRRIQ3A6PVS8 624 aaPredicted RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 SGK1O00141 431 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 HOXC11O43248 304 aaPredicted RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 CLSTN1O94985 981 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 ZDHHC11BP0C7U3 371 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 TRIM21P19474 475 aaKnown RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 CASP4P49662 377 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 NOVA1P51513 510 aaKnown RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 SLC5A3P53794 718 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 ZBED6P86452 979 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 EMC10Q5UCC4 262 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 TRMT11Q7Z4G4 463 aaKnown RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 SLC9A9Q8IVB4 645 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 SFTPA1Q8IWL2 248 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 ETFBKMTQ8IXQ9 262 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 PHTF2Q8N3S3 785 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 TTYH3Q9C0H2 523 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 KCTD10Q9H3F6 313 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 EVLQ9UI08 416 aaPredicted RBP13.29□□□□□ -0.28
CTSD-208ENST00000636843 DNAI1Q9UI46 699 aa13.29□□□□□ -0.28
CTSD-208ENST00000636843 TBC1D3BA6NDS4 549 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 MAP3K13O43283 966 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 AP1G2O75843 785 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 VNN1O95497 513 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 DPP6P42658 865 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 KDSRQ06136 332 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 SGSM1Q2NKQ1 1148 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 SCARA5Q6ZMJ2 495 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 FUKQ8N0W3 1084 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 PIGKQ92643 395 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 PCMTD1Q96MG8 357 aaPredicted RBP13.28□□□□□ -0.28
CTSD-208ENST00000636843 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 FBXO44Q9H4M3 255 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 CCSER2Q9H7U1 834 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 SPHK2Q9NRA0 654 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 KRT82Q9NSB4 513 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 ZNHIT6Q9NWK9 470 aaKnown RBP13.28□□□□□ -0.28
CTSD-208ENST00000636843 GMIPQ9P107 970 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 BCCIPQ9P287 314 aaKnown RBP eCLIP13.28□□□□□ -0.28
CTSD-208ENST00000636843 DEC1Q9P2X7 70 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 TRAF3IP3Q9Y228 551 aa13.28□□□□□ -0.28
CTSD-208ENST00000636843 PATE3B3GLJ2 98 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 RNF225M0QZC1 329 aaPredicted RBP13.27□□□□□ -0.29
CTSD-208ENST00000636843 CDX4O14627 284 aaPredicted RBP13.27□□□□□ -0.29
CTSD-208ENST00000636843 CALUO43852 315 aaPredicted RBP13.27□□□□□ -0.29
CTSD-208ENST00000636843 ADAM23O75077 832 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 SLU7O95391 586 aaKnown RBP13.27□□□□□ -0.29
CTSD-208ENST00000636843 CSRP1P21291 193 aaKnown RBP13.27□□□□□ -0.29
CTSD-208ENST00000636843 IRX4P78413 519 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 CDK17Q00537 523 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 LMAN2Q12907 356 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 MEA1Q16626 185 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 CCDC40Q4G0X9 1142 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 UNC93AQ86WB7 457 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 SYT12Q8IV01 421 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 CRYBG2Q8N1P7 616 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 TMC2Q8TDI7 906 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 HMGB4Q8WW32 186 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 RLN3Q8WXF3 142 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 TAF4BQ92750 862 aa13.27□□□□□ -0.29
CTSD-208ENST00000636843 EEF2KMTQ96G04 330 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms