RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PLEKHA7Q6IQ23 1121 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 PMF1Q6P1K2 205 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 MSANTD2Q6P1R3 559 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 DENND1BQ6P3S1 775 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 OLFML1Q6UWY5 402 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 H2AFVQ71UI9 128 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 PDZD4Q76G19 769 aaPredicted RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 DNAJB7Q7Z6W7 309 aaPredicted RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 RBM23Q86U06 439 aaKnown RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 DDX42Q86XP3 938 aaKnown RBP eCLIP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 TMC8Q8IU68 726 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 MCOLN2Q8IZK6 566 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 WDTC1Q8N5D0 677 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 RFFLQ8WZ73 363 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 SMG7Q92540 1137 aaKnown RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 MRPS31Q92665 395 aaKnown RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 FBXO32Q969P5 355 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 MCRS1Q96EZ8 462 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 PGAP3Q96FM1 320 aaPredicted RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 MSLNLQ96KJ4 702 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 GUCD1Q96NT3 240 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 CPXM1Q96SM3 734 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 ADAM7Q9H2U9 754 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 CRISPLD1Q9H336 500 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 KIF9Q9HAQ2 790 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 POPDC2Q9HBU9 364 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 ACP6Q9NPH0 428 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 TMEM30AQ9NV96 361 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 PARVAQ9NVD7 372 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 TRPM5Q9NZQ8 1165 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 ADAM22Q9P0K1 906 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 STAP1Q9ULZ2 295 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 EPN1Q9Y6I3 576 aaPredicted RBP7.04□□□□□ -1.28
UPF3B-205ENST00000636792 TRANK1O15050 2925 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 LAMA3Q16787 3333 aa7.04□□□□□ -1.28
UPF3B-205ENST00000636792 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 ESPNB1AK53 854 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 RFXAPO00287 272 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 PER2O15055 1255 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 PJA2O43164 708 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 KRT86O43790 486 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 TBX10O75333 385 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 LATS1O95835 1130 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 F9P00740 461 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 OAS1P00973 400 aaKnown RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 F11P03951 625 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 RHOP08100 348 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 RALAP11233 206 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 SKILP12757 684 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 VAV2P52735 878 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CACNA2D1P54289 1103 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 AIF1P55008 147 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 YWHAZP63104 245 aaKnown RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 SNRPNP63162 240 aaKnown RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 GPC5P78333 572 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CCZ1BP86790 482 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CCZ1P86791 482 aaPredicted RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 SLC6A3Q01959 620 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 GOLGA8FQ08AF8 430 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 GOLGA8DPQ0D2H9 430 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 SMAD4Q13485 552 aaKnown RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 IFI16Q16666 785 aaKnown RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CCDC142Q17RM4 750 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 AAK1Q2M2I8 961 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 ATAT1Q5SQI0 421 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CCDC122Q5T0U0 273 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 DNAJC24Q6P3W2 148 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 XYLT1Q86Y38 959 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 PASD1Q8IV76 773 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 NIPA2Q8N8Q9 360 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 UBA3Q8TBC4 463 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 MYLIPQ8WY64 445 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 E2F7Q96AV8 911 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 ZNF707Q96C28 371 aaPredicted RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 ZNF653Q96CK0 615 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 SERPINB11Q96P15 392 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 SLC2A13Q96QE2 648 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 KCNK16Q96T55 309 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 PCDHB18PQ96TA0 734 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CHP1Q99653 195 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 C11orf70Q9BRQ4 267 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 SELENOOQ9BVL4 669 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 LRRC3Q9BY71 257 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 ULBP1Q9BZM6 244 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 UBE2ZQ9H832 354 aaPredicted RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 PIDD1Q9HB75 910 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 WDR6Q9NNW5 1121 aaKnown RBP7.03□□□□□ -1.28
UPF3B-205ENST00000636792 ST7Q9NRC1 585 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CLDND1Q9NY35 253 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 OBP2AQ9NY56 170 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 GDE1Q9NZC3 331 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CYTH4Q9UIA0 394 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CD207Q9UJ71 328 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 USTQ9Y2C2 406 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 PCDHGC5Q9Y5F6 944 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CHD9Q3L8U1 2897 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 CHD7Q9P2D1 2997 aa7.03□□□□□ -1.28
UPF3B-205ENST00000636792 BRWD1Q9NSI6 2320 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms