RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 WDFY3Q8IZQ1 3526 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 ATXN2Q99700 1313 aaKnown RBP13.24□□□□□ -0.29
PTPN11-206ENST00000635652 A0A1W2PQF6 199 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 PRRT4C9JH25 899 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 AP5Z1O43299 807 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 SMC2O95347 1197 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 CHKAP35790 457 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 NOVA1P51513 510 aaKnown RBP13.24□□□□□ -0.29
PTPN11-206ENST00000635652 MCCD1P59942 119 aaPredicted RBP13.24□□□□□ -0.29
PTPN11-206ENST00000635652 LMAN2Q12907 356 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 CBWD6Q4V339 395 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 CBWD3Q5JTY5 395 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 SPDYCQ5MJ68 293 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 CBWD5Q5RIA9 395 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 ZNF658Q5TYW1 1059 aaPredicted RBP13.24□□□□□ -0.29
PTPN11-206ENST00000635652 LYSMD4Q5XG99 296 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 ANKRD40Q6AI12 368 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 SLC36A4Q6YBV0 504 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 Q6ZNB5 142 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 ANKRD52Q8NB46 1076 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 UBXN6Q9BZV1 441 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 DCLK3Q9C098 648 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 TMEM74BQ9NUR3 256 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 CACNA2D2Q9NY47 1150 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 STRIP2Q9ULQ0 834 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 RAD54BQ9Y620 910 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 TNRC6BQ9UPQ9 1833 aaKnown RBP13.24□□□□□ -0.29
PTPN11-206ENST00000635652 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
PTPN11-206ENST00000635652 ADAMTS9Q9P2N4 1935 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 CACNA1EQ15878 2313 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 KLKB1P03952 638 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 CFIP05156 583 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 CISD3P0C7P0 127 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 ITPKAP23677 461 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 PMLP29590 882 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 CORO1AP31146 461 aaKnown RBP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 DPP6P42658 865 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 MAPK8P45983 427 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 TKTL1P51854 596 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 YWHAGP61981 247 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 FKBP3Q00688 224 aaKnown RBP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 CUL2Q13617 745 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 GOLGA7BQ2TAP0 167 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 SGO2Q562F6 1265 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 ARHGAP17Q68EM7 881 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 KIAA1211LQ6NV74 962 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 DENND1CQ8IV53 801 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 ERCC4Q92889 916 aaPredicted RBP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 SMARCE1Q969G3 411 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 GSDMAQ96QA5 445 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 FAM124BQ9H5Z6 455 aaPredicted RBP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 MARCH2Q9P0N8 246 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 ARMCX3Q9UH62 379 aaPredicted RBP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 EVLQ9UI08 416 aaPredicted RBP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 HOOK1Q9UJC3 728 aaKnown RBP13.23□□□□□ -0.29
PTPN11-206ENST00000635652 PILRBQ9UKJ0 227 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 CYP8B1Q9UNU6 501 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
PTPN11-206ENST00000635652 SLC12A8A0AV02 714 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 WASH3PC4AMC7 463 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 GIPC1O14908 333 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 SLC16A3O15427 465 aaKnown RBP13.22□□□□□ -0.29
PTPN11-206ENST00000635652 ZNF217O75362 1048 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 ZBED1O96006 694 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 CYBBP04839 570 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 CD19P15391 556 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 NDUFV2P19404 249 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
PTPN11-206ENST00000635652 YWHAEP62258 255 aaKnown RBP13.22□□□□□ -0.29
PTPN11-206ENST00000635652 PDE4CQ08493 712 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 LRMPQ12912 555 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 STARD3Q14849 445 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 ST3GAL2Q16842 350 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 RAB41Q5JT25 222 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 DDI1Q8WTU0 396 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 NDRG1Q92597 394 aaKnown RBP13.22□□□□□ -0.29
PTPN11-206ENST00000635652 IPO9Q96P70 1041 aaKnown RBP13.22□□□□□ -0.29
PTPN11-206ENST00000635652 GABRG3Q99928 467 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 ULBP1Q9BZM6 244 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 SLC6A17Q9H1V8 727 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 LRRC4Q9HBW1 653 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 HESX1Q9UBX0 185 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 TSPAN16Q9UKR8 245 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 AGO1Q9UL18 857 aaKnown RBP13.22□□□□□ -0.29
PTPN11-206ENST00000635652 COQ4Q9Y3A0 265 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 SPEGQ15772 3267 aa13.22□□□□□ -0.29
PTPN11-206ENST00000635652 ZFHX4Q86UP3 3567 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 IGHV1OR15-9A0A0B4J2B8 117 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 TRIM49BA6NDI0 452 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 TULP2O00295 520 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 GFRA2O00451 464 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 XPO1O14980 1071 aaKnown RBP13.21□□□□□ -0.29
PTPN11-206ENST00000635652 NDUFS2O75306 463 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 KRT37O76014 449 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 ENGP17813 658 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
PTPN11-206ENST00000635652 BCAT1P54687 386 aa13.21□□□□□ -0.29
PTPN11-206ENST00000635652 MFAP3P55082 362 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms