RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SNX27Q96L92 541 aa8.36□□□□□ -1.07
GPC3-204ENST00000631057 ANKRD27Q96NW4 1050 aa8.36□□□□□ -1.07
GPC3-204ENST00000631057 QKIQ96PU8 341 aaKnown RBP eCLIP8.36□□□□□ -1.072e-7■■■■□ 22.6
GPC3-204ENST00000631057 FAM111AQ96PZ2 611 aa8.36□□□□□ -1.07
GPC3-204ENST00000631057 GCOM2Q9BZD3 368 aaPredicted RBP8.36□□□□□ -1.07
GPC3-204ENST00000631057 TUT1Q9H6E5 874 aaKnown RBP8.36□□□□□ -1.07
GPC3-204ENST00000631057 CDHR5Q9HBB8 845 aa8.36□□□□□ -1.07
GPC3-204ENST00000631057 XAB2Q9HCS7 855 aaKnown RBP8.36□□□□□ -1.07
GPC3-204ENST00000631057 FAM49BQ9NUQ9 324 aa8.36□□□□□ -1.07
GPC3-204ENST00000631057 MKS1Q9NXB0 559 aa8.36□□□□□ -1.07
GPC3-204ENST00000631057 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.36□□□□□ -1.07
GPC3-204ENST00000631057 KIAA1522Q9P206 1035 aaPredicted RBP8.36□□□□□ -1.07
GPC3-204ENST00000631057 MTO1Q9Y2Z2 717 aaKnown RBP8.36□□□□□ -1.07
GPC3-204ENST00000631057 A0A0G2JND7 137 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 RRN3P2A6NIE6 340 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 I3L4J1 428 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 STRNO43815 780 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 AVILO75366 819 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 AP1G2O75843 785 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 APOEP02649 317 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 C1QAP02745 245 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 T-ENOLP0DO92 83 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ADORA2AP29274 412 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 L1CAMP32004 1257 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 CCNFP41002 786 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 MAGEA3P43357 314 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ARFIP2P53365 341 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 HDAC4P56524 1084 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SARNPP82979 210 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 CDK16Q00536 496 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ZBTB16Q05516 673 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 BST2Q10589 180 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 PRKD1Q15139 912 aaPredicted RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 PCBP1Q15365 356 aaKnown RBP eCLIP8.35□□□□□ -1.075e-63■□□□□ 8.9
GPC3-204ENST00000631057 ZBTB6Q15916 424 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 CA9Q16790 459 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 NOTUMQ6P988 496 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 TLDC1Q6P9B6 456 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ZNF449Q6P9G9 518 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 BZW1Q7L1Q6 419 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 CATSPER4Q7RTX7 472 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 MTDHQ86UE4 582 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 LONP2Q86WA8 852 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 OR6B3Q8NGW1 331 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 RFWD2Q8NHY2 731 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 GSDMBQ8TAX9 411 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SH3TC2Q8TF17 1288 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 CENPIQ92674 756 aaPredicted RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 N4BP2L2Q92802 583 aaPredicted RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 KHSRPQ92945 711 aaKnown RBP eCLIP8.35□□□□□ -1.074e-7■■□□□ 14.3
GPC3-204ENST00000631057 UTP4Q969X6 686 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 TTC17Q96AE7 1141 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SLC7A6OSQ96CW6 309 aaPredicted RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 ZNF560Q96MR9 790 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SRPK1Q96SB4 655 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 TSPAN18Q96SJ8 248 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 TBC1D10AQ9BXI6 508 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 TLE6Q9H808 572 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 GEMIN8Q9NWZ8 242 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 SNTG2Q9NY99 539 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 KANSL3Q9P2N6 904 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 DCTN4Q9UJW0 460 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 AP4E1Q9UPM8 1137 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 L3MBTL1Q9Y468 752 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SLC15A5A6NIM6 579 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 FAM159BA6NKW6 160 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 A8MXQ7 604 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 HACD1B0YJ81 288 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 E7ENQ6 273 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 KIF3CO14782 793 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 XPOTO43592 962 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 DNAJC6O75061 913 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ZNF189O75820 626 aaPredicted RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 STK10O94804 968 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 CBX6O95503 412 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 CD4P01730 458 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 LMNAP02545 664 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 MMP3P08254 477 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 BGNP21810 368 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 IBSPP21815 317 aaPredicted RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 CNTFP26441 200 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 FDFT1P37268 417 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 PNPLA4P41247 253 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ADCYAP1R1P41586 468 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 OVGP1Q12889 678 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SEMA5AQ13591 1074 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 KRT72Q14CN4 511 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 DGKDQ16760 1214 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ACCSLQ4AC99 568 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 MARCH8Q5T0T0 291 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SYCP2LQ5T4T6 812 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 FAXCQ5TGI0 409 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 FAM91A1Q658Y4 838 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ATG16L1Q676U5 607 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 UNC5AQ6ZN44 842 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 PRPF39Q86UA1 669 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 SCUBE3Q8IX30 993 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ANKRD52Q8NB46 1076 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 CFAP61Q8NHU2 1237 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 RAB3IL1Q8TBN0 382 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms