RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 AMPD1P23109 780 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 GCAP28676 217 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 RBL1P28749 1068 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 PHBP35232 272 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ARL4AP40617 200 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 CXCR3P49682 368 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 SULT1E1P49888 294 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 CDK7P50613 346 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ATXN1P54253 815 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 GPX6P59796 221 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 RNASELQ05823 741 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 DEUP1Q05D60 604 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 DSC1Q08554 894 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 SLC10A2Q12908 348 aaPredicted RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 PDIA2Q13087 525 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 PAFAH1B3Q15102 231 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 LONRF1Q17RB8 773 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 SKIDA1Q1XH10 827 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 SLC45A4Q5BKX6 768 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 INTS6LQ5JSJ4 861 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 EFHC2Q5JST6 749 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 FNBP1LQ5T0N5 605 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 OTUD1Q5VV17 481 aaPredicted RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 SYPL2Q5VXT5 272 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ANKRD22Q5VYY1 191 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 TTC19Q6DKK2 380 aaPredicted RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 BHLHA9Q7RTU4 235 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ZC3H18Q86VM9 953 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 CYP4X1Q8N118 509 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 PDIK1LQ8N165 341 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 CCDC185Q8N715 623 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 SLAIN1Q8ND83 568 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 RAET1EQ8TD07 263 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 PYROXD1Q8WU10 500 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ATXN2LQ8WWM7 1075 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 NDRG1Q92597 394 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 ARHGEF2Q92974 986 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 FAM149B1Q96BN6 582 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 LRRC39Q96DD0 335 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 SMARCD1Q96GM5 515 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 OLFM3Q96PB7 478 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 PAAF1Q9BRP4 392 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 TRIM62Q9BVG3 475 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ULBP1Q9BZM6 244 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 BRD8Q9H0E9 1235 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 TRPV6Q9H1D0 765 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 C10orf88Q9H8K7 445 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 WDR6Q9NNW5 1121 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 KRT82Q9NSB4 513 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 DNAJC17Q9NVM6 304 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 SENP1Q9P0U3 644 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 XPO7Q9UIA9 1087 aaKnown RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 RABGEF1Q9UJ41 708 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 PHF24Q9UPV7 400 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 TIMM13Q9Y5L4 95 aaPredicted RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 TEX264Q9Y6I9 313 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 COL4A4P53420 1690 aaPredicted RBP5.77□□□□□ -1.49
NEK3-211ENST00000629912 NLRC5Q86WI3 1866 aa5.77□□□□□ -1.49
NEK3-211ENST00000629912 ZNF638Q14966 1978 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 EXOC1LA0A1B0GW35 172 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 SMIM23A6NLE4 172 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 NDUFAB1O14561 156 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ENPP3O14638 875 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 CAPN9O14815 690 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 NCAM2O15394 837 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 KCNN4O15554 427 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 FKTNO75072 461 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 FAM155BO75949 473 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 DDHD2O94830 711 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 LTFP02788 710 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 MYCNP04198 464 aaPredicted RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 INHAP05111 366 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 USP17L7P0C7H9 530 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ATP2A2P16615 1042 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 TPSB2P20231 275 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 DRD4P21917 467 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 CYP2C18P33260 490 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 SLCO1A2P46721 670 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 BRCC3P46736 316 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 GLUD2P49448 558 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 SEC24CP53992 1094 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 CACNA2D1P54289 1103 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 GEMIN4P57678 1058 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 CDK16Q00536 496 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 TSPY1Q01534 308 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 GBE1Q04446 702 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 SEMA3BQ13214 749 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 EIF4EBP2Q13542 120 aaPredicted RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 DPYSQ14117 519 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 MRPL58Q14197 206 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 MBTPS1Q14703 1052 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 FASTKD3Q14CZ7 662 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 PDK1Q15118 436 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 TPSAB1Q15661 275 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 KLHL38Q2WGJ6 581 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ARL13BQ3SXY8 428 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 MSS51Q4VC12 460 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 CCDC38Q502W7 563 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 PPP6R3Q5H9R7 873 aaPredicted RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 NOMO2Q5JPE7 1267 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms