RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 GABRG3Q99928 467 aa17.4■□□□□ 0.38
PDCD6-214ENST00000628729 CACNA2D2Q9NY47 1150 aa17.4■□□□□ 0.38
PDCD6-214ENST00000628729 RASAL2Q9UJF2 1139 aa17.4■□□□□ 0.38
PDCD6-214ENST00000628729 FBXO10Q9UK96 956 aa17.4■□□□□ 0.38
PDCD6-214ENST00000628729 ADAMTS9Q9P2N4 1935 aa17.4■□□□□ 0.38
PDCD6-214ENST00000628729 AKAP13Q12802 2813 aa17.39■□□□□ 0.38
PDCD6-214ENST00000628729 IGHV1OR15-9A0A0B4J2B8 117 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 WASH3PC4AMC7 463 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 KHNYNO15037 678 aaKnown RBP17.39■□□□□ 0.37
PDCD6-214ENST00000628729 CETN3O15182 167 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 SLC16A3O15427 465 aaKnown RBP17.39■□□□□ 0.37
PDCD6-214ENST00000628729 KRT37O76014 449 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 PENKP01210 267 aaPredicted RBP17.39■□□□□ 0.37
PDCD6-214ENST00000628729 HMBSP08397 361 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 TRIM21P19474 475 aaKnown RBP17.39■□□□□ 0.37
PDCD6-214ENST00000628729 ITPKAP23677 461 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 CORO1AP31146 461 aaKnown RBP17.39■□□□□ 0.37
PDCD6-214ENST00000628729 DGKGP49619 791 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 PSEN1P49768 467 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 EFEMP1Q12805 493 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 CUL2Q13617 745 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 GOLGA7BQ2TAP0 167 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 TCERG1LQ5VWI1 586 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 LPCAT2Q7L5N7 544 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 TRMT11Q7Z4G4 463 aaKnown RBP17.39■□□□□ 0.37
PDCD6-214ENST00000628729 CHPFQ8IZ52 775 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 PGBD3Q8N328 593 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 XPO6Q96QU8 1125 aaKnown RBP17.39■□□□□ 0.37
PDCD6-214ENST00000628729 FSCN3Q9NQT6 498 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 WDR35Q9P2L0 1181 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 EVLQ9UI08 416 aaPredicted RBP17.39■□□□□ 0.37
PDCD6-214ENST00000628729 CLEC4EQ9ULY5 219 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 GTF3C3Q9Y5Q9 886 aa17.39■□□□□ 0.37
PDCD6-214ENST00000628729 CD44P16070 742 aaKnown RBP17.38■□□□□ 0.37
PDCD6-214ENST00000628729 PDE4CQ08493 712 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 PREPLQ4J6C6 727 aaPredicted RBP17.38■□□□□ 0.37
PDCD6-214ENST00000628729 TRIM61Q5EBN2 209 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 DEFB119Q8N690 84 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 ANKRD52Q8NB46 1076 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 IPO4Q8TEX9 1081 aaKnown RBP17.38■□□□□ 0.37
PDCD6-214ENST00000628729 ULBP1Q9BZM6 244 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 TMEM9BQ9NQ34 198 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 PILRBQ9UKJ0 227 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 TSPAN16Q9UKR8 245 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 AGO1Q9UL18 857 aaKnown RBP17.38■□□□□ 0.37
PDCD6-214ENST00000628729 CKAP5Q14008 2032 aa17.38■□□□□ 0.37
PDCD6-214ENST00000628729 ASCC3Q8N3C0 2202 aaKnown RBP17.37■□□□□ 0.37
PDCD6-214ENST00000628729 ZZEF1O43149 2961 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 GABBR2O75899 941 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 RALAP11233 206 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 PI4KAP42356 2102 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 NOVA1P51513 510 aaKnown RBP17.37■□□□□ 0.37
PDCD6-214ENST00000628729 TKTL1P51854 596 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 MFAP3P55082 362 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 YWHAGP61981 247 aaKnown RBP eCLIP17.37■□□□□ 0.377e-7■■■■■ 27.7
PDCD6-214ENST00000628729 SHC2P98077 582 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 GEN1Q17RS7 908 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 LYSMD4Q5XG99 296 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 PM20D1Q6GTS8 502 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 SYT12Q8IV01 421 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 SLC41A1Q8IVJ1 513 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 GSDMAQ96QA5 445 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 RMND1Q9NWS8 449 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 ANGPTL2Q9UKU9 493 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 GON4LQ3T8J9 2241 aa17.37■□□□□ 0.37
PDCD6-214ENST00000628729 O00370 1275 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 XPO1O14980 1071 aaKnown RBP17.36■□□□□ 0.37
PDCD6-214ENST00000628729 MAP3K13O43283 966 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 STX10O60499 249 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 FKBP3Q00688 224 aaKnown RBP17.36■□□□□ 0.37
PDCD6-214ENST00000628729 RPL6Q02878 288 aaKnown RBP17.36■□□□□ 0.37
PDCD6-214ENST00000628729 LRMPQ12912 555 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 PKDCCQ504Y2 493 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 SH3PXD2AQ5TCZ1 1133 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 TADA2BQ86TJ2 420 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 DENND1CQ8IV53 801 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 FAM217AQ8IXS0 508 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 TTC39CQ8N584 583 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 RBBP8NLQ8NC74 664 aaPredicted RBP17.36■□□□□ 0.37
PDCD6-214ENST00000628729 KAT5Q92993 513 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 PIWIL1Q96J94 861 aaKnown RBP17.36■□□□□ 0.37
PDCD6-214ENST00000628729 MRGPRX1Q96LB2 322 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 ZSWIM1Q9BR11 485 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 UBXN6Q9BZV1 441 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 FAM124BQ9H5Z6 455 aaPredicted RBP17.36■□□□□ 0.37
PDCD6-214ENST00000628729 MARCH2Q9P0N8 246 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 CYP8B1Q9UNU6 501 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 WASF3Q9UPY6 502 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 SLC27A6Q9Y2P4 619 aa17.36■□□□□ 0.37
PDCD6-214ENST00000628729 ZBED1O96006 694 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 CALCAP01258 141 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 ENGP17813 658 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 BMP6P22004 513 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 IL12RB1P42701 662 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 BCAT1P54687 386 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 COG7P83436 770 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 LRRC63Q05C16 580 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 ADIGQ0VDE8 80 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 ENPP2Q13822 863 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 SPDYCQ5MJ68 293 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms