RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SLC8A3P57103 927 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 YWHAEP62258 255 aaKnown RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 MORC3Q14149 939 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 LRRC32Q14392 662 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 ZNF268Q14587 947 aaPredicted RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 PPP2R5DQ14738 602 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 ANGPT1Q15389 498 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 CAMK4Q16566 473 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 ITPRIPL2Q3MIP1 535 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 C1orf220Q5T0J3 134 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 FRMD5Q7Z6J6 570 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 FILIP1Q7Z7B0 1213 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 TMEM150AQ86TG1 271 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 C1orf210Q8IVY1 113 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 CRYBG2Q8N1P7 616 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 ARL14EPQ8N8R7 260 aaPredicted RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 TRIML1Q8N9V2 468 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 PDZD8Q8NEN9 1154 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 TTC8Q8TAM2 541 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 SLC2A14Q8TDB8 520 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 STK32AQ8WU08 396 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 NELFBQ8WX92 580 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 USP13Q92995 863 aaPredicted RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 FBXO32Q969P5 355 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 RSPRY1Q96DX4 576 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 FAXDC2Q96IV6 333 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 ZFYVE19Q96K21 471 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 HEXIM2Q96MH2 286 aaKnown RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 PSMG3-AS1Q96PY0 264 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 CYP2S1Q96SQ9 504 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 DDX23Q9BUQ8 820 aaKnown RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 ZNF518BQ9C0D4 1074 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 NACA2Q9H009 215 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 SDCBP2Q9H190 292 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 LTB4R2Q9NPC1 389 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 DMAP1Q9NPF5 467 aaPredicted RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 GKN1Q9NS71 199 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 KRT82Q9NSB4 513 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 FAM49BQ9NUQ9 324 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 FAM86C1Q9NVL1 165 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 COMMD8Q9NX08 183 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 CTNND2Q9UQB3 1225 aa6.77□□□□□ -1.33
TCF4-249ENST00000625716 MTF2Q9Y483 593 aaPredicted RBP6.77□□□□□ -1.33
TCF4-249ENST00000625716 C2orf78A6NCI8 922 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 LRRN2O75325 713 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 GNA14O95837 355 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 FAM200BP0CF97 657 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 CCDC192P0DO97 292 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 MBL2P11226 248 aaPredicted RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 CCDC130P13994 396 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 ADORA2BP29275 332 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 RPS9P46781 194 aaKnown RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 MRE11P49959 708 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 PMS1P54277 932 aaKnown RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 STX17P56962 302 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 MAP3K7CLP57077 242 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 TAF10Q12962 218 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 PAK1Q13153 545 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 ORC1Q13415 861 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 ELOAQ14241 798 aaKnown RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 PDGFRLQ15198 375 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 TPD52L1Q16890 204 aaPredicted RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 SWI5Q1ZZU3 235 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 ZNF394Q53GI3 561 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 DGKKQ5KSL6 1271 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 ZC3H14Q6PJT7 736 aaKnown RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 IGF2-ASQ6U949 168 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 RALGPS2Q86X27 583 aaPredicted RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 CREBRFQ8IUR6 639 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 CPA6Q8N4T0 437 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 OVCA2Q8WZ82 227 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 PLD4Q96BZ4 506 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 CYFIP2Q96F07 1278 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 MEGF10Q96KG7 1140 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 KCNK16Q96T55 309 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 TTLL2Q9BWV7 592 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 FBXO44Q9H4M3 255 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 FAM124BQ9H5Z6 455 aaPredicted RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 LMAN1LQ9HAT1 526 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 APOBEC3GQ9HC16 384 aaKnown RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 DUS2Q9NX74 493 aaKnown RBP6.76□□□□□ -1.33
TCF4-249ENST00000625716 GTSE1Q9NYZ3 720 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 CCL26Q9Y258 94 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 NME7Q9Y5B8 376 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 NOTCH4Q99466 2003 aa6.76□□□□□ -1.33
TCF4-249ENST00000625716 C5orf42Q9H799 3197 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 DOCK8Q8NF50 2099 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 SCO2A0A1W2PP80 73 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 ZNF840PA6NDX5 716 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 SPECC1L-ADORA2AF8WAN1 911 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 GOLGA6L22H0YM25 854 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 SLC9A3R1O14745 358 aaPredicted RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 CILPO75339 1184 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 TADA3O75528 432 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 TBXAS1P24557 533 aaPredicted RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 SOX9P48436 509 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 FMO5P49326 533 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 SLC5A3P53794 718 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms