RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 TBC1D13Q9NVG8 400 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 GTSE1Q9NYZ3 720 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 TBC1D14Q9P2M4 693 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 NHSQ6T4R5 1651 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 TARSL2A2RTX5 802 aaKnown RBP10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 SIGLEC16A6NMB1 481 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 XPO1O14980 1071 aaKnown RBP10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 ZNF185O15231 689 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 MAP3K6O95382 1288 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 SPATA31D3P0C874 917 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 HDAC4P56524 1084 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 UGT3A1Q6NUS8 523 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 SPATA31D4Q6ZUB0 917 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 ADCK2Q7Z695 626 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 ATXN7L3BQ96GX2 97 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 SNX27Q96L92 541 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 OSGEPQ9NPF4 335 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 UBA2Q9UBT2 640 aaPredicted RBP10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 SEPT3Q9UH03 358 aa10.53□□□□□ -0.72
SRGAP2-217ENST00000624873 KPNA3O00505 521 aaPredicted RBP10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 DHX15O43143 795 aaKnown RBP10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 CLCNKBP51801 687 aa10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 MARSP56192 900 aaKnown RBP10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 ZC3H12AQ5D1E8 599 aaKnown RBP10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 PHLDB3Q6NSJ2 640 aa10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 ATAD1Q8NBU5 361 aa10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 HJURPQ8NCD3 748 aaPredicted RBP10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 ACBD6Q9BR61 282 aa10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 VCXQ9H320 206 aa10.52□□□□□ -0.72
SRGAP2-217ENST00000624873 ITGB4P16144 1822 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 A0A0U1RQF3 1178 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 SEC31AO94979 1220 aaKnown RBP10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 ADH1CP00326 375 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 PRKCIP41743 596 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 CASP2P42575 452 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 NR2C2P49116 596 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 TARBP2Q15633 366 aaKnown RBP10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 GPR158Q5T848 1215 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 CELF6Q96J87 481 aaKnown RBP10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 TRIM51Q9BSJ1 452 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 DRG1Q9Y295 367 aaKnown RBP10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 COL18A1P39060 1754 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 DDX3XO00571 662 aaKnown RBP eCLIP10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 GLI1P08151 1106 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 NPY5RQ15761 445 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 METTL3Q86U44 580 aaKnown RBP10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 KIRREL3Q8IZU9 778 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 PPP1R16AQ96I34 528 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 ERP44Q9BS26 406 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 LRRC1Q9BTT6 524 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 SPATA16Q9BXB7 569 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 FAM129AQ9BZQ8 928 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 SLC13A1Q9BZW2 595 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 OR12D3Q9UGF7 316 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 RAB23Q9ULC3 237 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 CHMP2BQ9UQN3 213 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 C5P01031 1676 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 PTPN2P17706 415 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 NR1D1P20393 614 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 MIPP30301 263 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 LILRA4P59901 499 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 PHEXP78562 749 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 INTS6LQ5JSJ4 861 aaKnown RBP10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 KCNT2Q6UVM3 1135 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 MYCBPAPQ8TBZ2 947 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 ACTL9Q8TC94 416 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 BCAS4Q8TDM0 211 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 ELMO2Q96JJ3 720 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 MRPL45Q9BRJ2 306 aaKnown RBP10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 SAGE1Q9NXZ1 904 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 SLC13A4Q9UKG4 626 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 TRHDEQ9UKU6 1024 aa10.52□□□□□ -0.73
SRGAP2-217ENST00000624873 HEATR9A2RTY3 570 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 SP100P23497 879 aaPredicted RBP10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 TBCCQ15814 346 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 SDHAF4Q5VUM1 108 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 C16orf59Q7L2K0 433 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 FAM228AQ86W67 206 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 C2orf15Q8WU43 125 aaKnown RBP10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 VAT1Q99536 393 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 SIK3Q9Y2K2 1263 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 BCL2L1Q07817 233 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 TTC31Q49AM3 519 aaPredicted RBP10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 SERPINA13PQ6UXR4 307 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 DENND1CQ8IV53 801 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 C9orf72Q96LT7 481 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 BBS2Q9BXC9 721 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 UBR2Q8IWV8 1755 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 RHOBTB1O94844 696 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 CYP2A6P11509 494 aaPredicted RBP10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 AMPD1P23109 780 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 MAPK8P45983 427 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 MRPS5P82675 430 aaKnown RBP10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 TAF10Q12962 218 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 C1orf127Q8N9H9 656 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 CFAP61Q8NHU2 1237 aa10.51□□□□□ -0.73
SRGAP2-217ENST00000624873 ZSCAN5CA6NGD5 496 aaPredicted RBP10.5□□□□□ -0.73
SRGAP2-217ENST00000624873 SDR42E2A6NKP2 422 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms