RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 DNAJC5GQ8N7S2 189 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 FAM71DQ8N9W8 422 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 ATP11CQ8NB49 1132 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 ZMIZ2Q8NF64 920 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 LRRC39Q96DD0 335 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 PAAF1Q9BRP4 392 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 TMEM175Q9BSA9 504 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 SAYSD1Q9NPB0 183 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 PRDM10Q9NQV6 1147 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 ABCC13Q9NSE7 274 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 SENP1Q9P0U3 644 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 LRFN2Q9ULH4 789 aa16.96■□□□□ 0.31
LDB3-208ENST00000623007 OR6C75A6NL08 312 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 E7ESA3 106 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 MTSS1O43312 755 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 GCATO75600 419 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 SHBGP04278 402 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 ADRA1BP35368 520 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 MAGEA6P43360 314 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 IRAK1P51617 712 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 MAGOHP61326 146 aaKnown RBP16.95■□□□□ 0.3
LDB3-208ENST00000623007 GNGT1P63211 74 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 CDK16Q00536 496 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 MTA1Q13330 715 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 MBTPS1Q14703 1052 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 PDK1Q15118 436 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 KYNUQ16719 465 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 CLLU1OSQ5K130 101 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 ACBD5Q5T8D3 534 aaPredicted RBP16.95■□□□□ 0.3
LDB3-208ENST00000623007 ZC3H18Q86VM9 953 aaKnown RBP16.95■□□□□ 0.3
LDB3-208ENST00000623007 UNC45BQ8IWX7 931 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 CPT1BQ92523 772 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 ZCWPW1Q9H0M4 648 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 FBXO44Q9H4M3 255 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 MTMR10Q9NXD2 777 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 SAE1Q9UBE0 346 aaPredicted RBP16.95■□□□□ 0.3
LDB3-208ENST00000623007 LGALS13Q9UHV8 139 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 HEY1Q9Y5J3 304 aa16.95■□□□□ 0.3
LDB3-208ENST00000623007 TLDC2A0PJX2 215 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 C5orf60A6NFR6 353 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 KCNN4O15554 427 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 TADA2AO75478 443 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 ZSCAN5DPP0CG00 497 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 SERPINB6P35237 376 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 CCDC142Q17RM4 750 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 BRMS1LQ5PSV4 323 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 HEATR6Q6AI08 1181 aaKnown RBP16.94■□□□□ 0.3
LDB3-208ENST00000623007 C1orf228Q6PIY5 440 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 FAM131BQ86XD5 332 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 SH2D3CQ8N5H7 860 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 CCDC185Q8N715 623 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 SLC7A14Q8TBB6 771 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 PYROXD1Q8WU10 500 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 RNF139Q8WU17 664 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 TFB1MQ8WVM0 346 aaKnown RBP16.94■□□□□ 0.3
LDB3-208ENST00000623007 CEP295NLQ96MC4 621 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 QKIQ96PU8 341 aaKnown RBP eCLIP16.94■□□□□ 0.3
LDB3-208ENST00000623007 KCTD15Q96SI1 283 aaPredicted RBP16.94■□□□□ 0.3
LDB3-208ENST00000623007 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 USP29Q9HBJ7 922 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 COMMD8Q9NX08 183 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 SLC24A2Q9UI40 661 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 FBXW11Q9UKB1 542 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 OGDHLQ9ULD0 1010 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 COL4A4P53420 1690 aaPredicted RBP16.94■□□□□ 0.3
LDB3-208ENST00000623007 PATJQ8NI35 1801 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 YJEFN3A6XGL0 299 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 E7ENQ6 273 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 H7C4K7 107 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 ENPP3O14638 875 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 ALDH2P05091 517 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 GSTA2P09210 222 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 USP17L7P0C7H9 530 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 MX2P20592 715 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 BDNFP23560 247 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 HPDP32754 393 aaPredicted RBP16.94■□□□□ 0.3
LDB3-208ENST00000623007 FDFT1P37268 417 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 MAGEA11P43364 429 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 OR1G1P47890 313 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 GDF10P55107 478 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 BASP1P80723 227 aaKnown RBP16.94■□□□□ 0.3
LDB3-208ENST00000623007 HTRA3P83110 453 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 PAFAH1B3Q15102 231 aaKnown RBP16.94■□□□□ 0.3
LDB3-208ENST00000623007 CA9Q16790 459 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 KLHL38Q2WGJ6 581 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 ZNF280DQ6N043 979 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 VPS52Q8N1B4 723 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 GLIS1Q8NBF1 620 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 MCUQ8NE86 351 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 C2orf15Q8WU43 125 aaKnown RBP16.94■□□□□ 0.3
LDB3-208ENST00000623007 C8orf48Q96LL4 319 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 TOX2Q96NM4 488 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 KCNK16Q96T55 309 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 EPAS1Q99814 870 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 GPATCH2LQ9NWQ4 482 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 DONSONQ9NYP3 566 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 CACNG4Q9UBN1 327 aa16.94■□□□□ 0.3
LDB3-208ENST00000623007 EEF2KO00418 725 aaKnown RBP16.93■□□□□ 0.3
LDB3-208ENST00000623007 ETS1P14921 441 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms