RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 TRIM62Q9BVG3 475 aa13.68□□□□□ -0.22
ATRX-208ENST00000622960 POLR3BQ9NW08 1133 aaPredicted RBP13.68□□□□□ -0.22
ATRX-208ENST00000622960 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATRX-208ENST00000622960 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.68□□□□□ -0.22
ATRX-208ENST00000622960 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.67□□□□□ -0.22
ATRX-208ENST00000622960 TYW5A2RUC4 315 aaKnown RBP13.67□□□□□ -0.22
ATRX-208ENST00000622960 SGK1O00141 431 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 BRD2P25440 801 aaKnown RBP13.67□□□□□ -0.22
ATRX-208ENST00000622960 NTSR1P30989 418 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 MPLP40238 635 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 KIR2DL1P43626 348 aaPredicted RBP13.67□□□□□ -0.22
ATRX-208ENST00000622960 CREB5Q02930 508 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 STARD3Q14849 445 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 CNGA2Q16280 664 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 PLK5Q496M5 336 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 IL31Q6EBC2 164 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 Q6ZNB5 142 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 RASSF3Q86WH2 238 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 DENND1CQ8IV53 801 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 SCML4Q8N228 414 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 UBR7Q8N806 425 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 DDI1Q8WTU0 396 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 IRGQQ8WZA9 623 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 WBP2Q969T9 261 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 PARD6AQ9NPB6 346 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 UBE2TQ9NPD8 197 aaPredicted RBP13.67□□□□□ -0.22
ATRX-208ENST00000622960 ST7Q9NRC1 585 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 VPS45Q9NRW7 570 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 DLL3Q9NYJ7 618 aa13.67□□□□□ -0.22
ATRX-208ENST00000622960 HBS1LQ9Y450 684 aaKnown RBP13.67□□□□□ -0.22
ATRX-208ENST00000622960 EP300Q09472 2414 aaPredicted RBP13.66□□□□□ -0.22
ATRX-208ENST00000622960 NPC1O15118 1278 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 GREM1O60565 184 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 DPP6P42658 865 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 ACADSBP45954 432 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 RGS7P49802 495 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 BSPRYQ5W0U4 402 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 LPCAT2Q7L5N7 544 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 ANKS1BQ7Z6G8 1248 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 FMNL3Q8IVF7 1028 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 ARHGEF19Q8IW93 802 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 PHTF2Q8N3S3 785 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 CPXM2Q8N436 756 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 DDX1Q92499 740 aaKnown RBP13.66□□□□□ -0.22
ATRX-208ENST00000622960 EDEM1Q92611 657 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 HSFY1Q96LI6 401 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 NUP62CLQ9H1M0 184 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 CLSTN2Q9H4D0 955 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 PLK2Q9NYY3 685 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 AGO1Q9UL18 857 aaKnown RBP13.66□□□□□ -0.22
ATRX-208ENST00000622960 STARD13Q9Y3M8 1113 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 ATG2BQ96BY7 2078 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 DMDP11532 3685 aa13.66□□□□□ -0.22
ATRX-208ENST00000622960 ZNF292O60281 2723 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 YJEFN3A6XGL0 299 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 E7ENQ6 273 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 TULP2O00295 520 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 CAPN9O14815 690 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 THAP12O43422 761 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 LATS1O95835 1130 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 LTFP02788 710 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 ZNF806P0C7X5 589 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
ATRX-208ENST00000622960 GNA15P30679 374 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 HOXC13P31276 330 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 USP8P40818 1118 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.22
ATRX-208ENST00000622960 DAOAP59103 153 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 EIF4HQ15056 248 aaKnown RBP13.65□□□□□ -0.22
ATRX-208ENST00000622960 EXOC3L4Q17RC7 722 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 MPPE1Q53F39 396 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 EMC10Q5UCC4 262 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 NUGGCQ68CJ6 796 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 TMEM92Q6UXU6 159 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 CCDC117Q8IWD4 279 aaPredicted RBP13.65□□□□□ -0.22
ATRX-208ENST00000622960 SFTPA1Q8IWL2 248 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 UNC45BQ8IWX7 931 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 ZNF557Q8N988 423 aaPredicted RBP13.65□□□□□ -0.22
ATRX-208ENST00000622960 LMO3Q8TAP4 145 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 KAT5Q92993 513 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 FAM149B1Q96BN6 582 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 DUSP15Q9H1R2 295 aaPredicted RBP13.65□□□□□ -0.22
ATRX-208ENST00000622960 INVSQ9Y283 1065 aa13.65□□□□□ -0.22
ATRX-208ENST00000622960 CFAP54Q96N23 3096 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 GFRA2O00451 464 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 PIK3R2O00459 728 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 PES1O00541 588 aaKnown RBP13.64□□□□□ -0.23
ATRX-208ENST00000622960 DCLK1O15075 740 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 AP5Z1O43299 807 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 ZNF217O75362 1048 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
ATRX-208ENST00000622960 PENKP01210 267 aaPredicted RBP13.64□□□□□ -0.23
ATRX-208ENST00000622960 WASP42768 502 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 SLC11A2P49281 568 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 SNX16P57768 344 aa13.64□□□□□ -0.23
ATRX-208ENST00000622960 MESP2Q0VG99 397 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms