RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ZACNQ401N2 412 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 FUT11Q495W5 492 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 C10orf120Q5SQS8 335 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 SDE2Q6IQ49 451 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 Q6ZNB5 142 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 RAB44Q7Z6P3 723 aaPredicted RBP11.54□□□□□ -0.56
LINC00963-214ENST00000622680 NAXDQ8IW45 347 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 ZCCHC9Q8N567 271 aaKnown RBP11.54□□□□□ -0.56
LINC00963-214ENST00000622680 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 ZNF396Q96N95 335 aaPredicted RBP11.54□□□□□ -0.56
LINC00963-214ENST00000622680 MKRN2Q9H000 416 aaKnown RBP11.54□□□□□ -0.56
LINC00963-214ENST00000622680 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00963-214ENST00000622680 WDR35Q9P2L0 1181 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 SCML2Q9UQR0 700 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 PTPRQQ9UMZ3 2332 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 KALRNO60229 2985 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 COL5A1P20908 1838 aaPredicted RBP11.53□□□□□ -0.56
LINC00963-214ENST00000622680 PVALEFA0A1B0GWK0 134 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 KCNJ18B7U540 433 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 K7ELQ4 463 aaPredicted RBP11.53□□□□□ -0.56
LINC00963-214ENST00000622680 ASS1P00966 412 aaKnown RBP11.53□□□□□ -0.56
LINC00963-214ENST00000622680 NR3C1P04150 777 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 FTH1P19P0C7X4 201 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 TRIM49P0CI25 452 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 TRIM49CP0CI26 452 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 P4HA1P13674 534 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 CD58P19256 250 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 AP3M2P53677 418 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 TRIP6Q15654 476 aaKnown RBP11.53□□□□□ -0.56
LINC00963-214ENST00000622680 GEN1Q17RS7 908 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 ZNF423Q2M1K9 1284 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 C1orf220Q5T0J3 134 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 RESP18Q5W5W9 173 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 SV2AQ7L0J3 742 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 CRYBG2Q8N1P7 616 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 TOE1Q96GM8 510 aaKnown RBP11.53□□□□□ -0.56
LINC00963-214ENST00000622680 ZNF419Q96HQ0 510 aaPredicted RBP11.53□□□□□ -0.56
LINC00963-214ENST00000622680 GPR174Q9BXC1 333 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 KCTD10Q9H3F6 313 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 IL21RQ9HBE5 538 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 EXOC1Q9NV70 894 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 DMAC2Q9NW81 257 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 SERTAD1Q9UHV2 236 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 RASAL2Q9UJF2 1139 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 PCDHA7Q9UN72 937 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 STON1Q9Y6Q2 735 aa11.53□□□□□ -0.56
LINC00963-214ENST00000622680 H0Y626 953 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 ACTN4O43707 911 aaKnown RBP11.52□□□□□ -0.57
LINC00963-214ENST00000622680 KIF20AO95235 890 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 TRIM16O95361 564 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 KLKB1P03952 638 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 CAPNS1P04632 268 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 NCAM1P13591 858 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 CD6P30203 668 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 IL12RB1P42701 662 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 ME1P48163 572 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 MFAP3P55082 362 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 INCA1Q0VD86 236 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 SCAPQ12770 1279 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 EFEMP1Q12805 493 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 STARD3Q14849 445 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 KMT5BQ4FZB7 885 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 SYCP2LQ5T4T6 812 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 CEP135Q66GS9 1140 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 LRSAM1Q6UWE0 723 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 SCD5Q86SK9 330 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 UNC93AQ86WB7 457 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 PROSER1Q86XN7 944 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 GOLGA5Q8TBA6 731 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 HNRNPABQ99729 332 aaKnown RBP11.52□□□□□ -0.57
LINC00963-214ENST00000622680 BACH2Q9BYV9 841 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 MIR1-1HGQ9H1L0 117 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 MMRN2Q9H8L6 949 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 PRDM16Q9HAZ2 1276 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 APOBEC3GQ9HC16 384 aaKnown RBP11.52□□□□□ -0.57
LINC00963-214ENST00000622680 USP36Q9P275 1121 aaKnown RBP11.52□□□□□ -0.57
LINC00963-214ENST00000622680 SUSD2Q9UGT4 822 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 CLEC4EQ9ULY5 219 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 PCDHB9Q9Y5E1 797 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 PCDHA5Q9Y5H7 936 aa11.52□□□□□ -0.57
LINC00963-214ENST00000622680 FAM221BA6H8Z2 402 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 GFRA2O00451 464 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 PENKP01210 267 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 RPN1P04843 607 aaKnown RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 GNSP15586 552 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 PRKCHP24723 683 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 CORO1AP31146 461 aaKnown RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 RDXP35241 583 aaKnown RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 PLA2G4AP47712 749 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 TPMTP51580 245 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 KIF11P52732 1056 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 WDR45BQ5MNZ6 344 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 PPP1R26Q5T8A7 1209 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 DCAF12L1Q5VU92 463 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 FYB2Q5VWT5 728 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 C19orf48Q6RUI8 117 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms