RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 RIPK1Q13546 671 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 SLC45A4Q5BKX6 768 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 VPS52Q8N1B4 723 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 ARRDC4Q8NCT1 418 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 APPL2Q8NEU8 664 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 FAM149B1Q96BN6 582 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 APOPT1Q96IL0 206 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 DTLQ9NZJ0 730 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 L3MBTL1Q9Y468 752 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 SYNJ2BP-COX16A0A087WUM0 186 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 CLDN5O00501 218 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 CBX6O95503 412 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 CD4P01730 458 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 NEK3P51956 506 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 SLC18A2Q05940 514 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 BMPR2Q13873 1038 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 OLFML2BQ68BL8 750 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 ZNF449Q6P9G9 518 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 TRMT10BQ6PF06 316 aaKnown RBP12.4□□□□□ -0.42
TP53-227ENST00000622645 UNC5AQ6ZN44 842 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 NLRP9Q7RTR0 991 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 PIGZQ86VD9 579 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 CDKL3Q8IVW4 592 aaPredicted RBP12.4□□□□□ -0.42
TP53-227ENST00000622645 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 PNPLA8Q9NP80 782 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.4□□□□□ -0.42
TP53-227ENST00000622645 COX16Q9P0S2 106 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 KANSL3Q9P2N6 904 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 GNEQ9Y223 722 aaKnown RBP12.4□□□□□ -0.42
TP53-227ENST00000622645 DCTN3O75935 186 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 BEST1O76090 585 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 DHRS4L1P0CG22 281 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 T-ENOLP0DO92 83 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 ACAT1P24752 427 aaKnown RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 SKIV2L2P42285 1042 aaKnown RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 MAGEA6P43360 314 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 TAF6P49848 677 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 CDC42EP1Q00587 391 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 MFSD10Q14728 455 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 FAM110CQ1W6H9 321 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 UBXN11Q5T124 520 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 FYB2Q5VWT5 728 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 NCBP2-AS2Q69YL0 99 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 TLK2Q86UE8 772 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 DEFB106AQ8N104 65 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 AGAP11Q8TF27 550 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 UTP4Q969X6 686 aaKnown RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 SIGLEC10Q96LC7 697 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 LGMNQ99538 433 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 NCAPGQ9BPX3 1015 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 GDAP2Q9NXN4 497 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 FLRT1Q9NZU1 646 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 CACNG4Q9UBN1 327 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 A0A0G2JND7 137 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 GCATO75600 419 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 NEFHP12036 1026 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 ALADP13716 330 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 BGNP21810 368 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 RPL34P49207 117 aaKnown RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 LILRA4P59901 499 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 ADIGQ0VDE8 80 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 TAF1BQ53T94 588 aaPredicted RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 DCAF6Q58WW2 860 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 TTC39BQ5VTQ0 682 aaPredicted RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 MTDHQ86UE4 582 aaKnown RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 OSTM1Q86WC4 334 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 SRPK1Q96SB4 655 aaKnown RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 FRMD8Q9BZ67 464 aaPredicted RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 TXLNGQ9NUQ3 528 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 PIH1D1Q9NWS0 290 aaKnown RBP12.39□□□□□ -0.43
TP53-227ENST00000622645 CPA4Q9UI42 421 aa12.39□□□□□ -0.43
TP53-227ENST00000622645 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 C2CD2LO14523 706 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 HUS1O60921 280 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 APOEP02649 317 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 CSH1P0DML2 217 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 CSH2P0DML3 217 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 VAV1P15498 845 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 PRKCHP24723 683 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 SLC8A1P32418 973 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 NDUFV1P49821 464 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 RABGGTBP53611 331 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 ADAM17P78536 824 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 BEX3Q00994 111 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 PREPLQ4J6C6 727 aaPredicted RBP12.38□□□□□ -0.43
TP53-227ENST00000622645 HEATR6Q6AI08 1181 aaKnown RBP12.38□□□□□ -0.43
TP53-227ENST00000622645 DENND5BQ6ZUT9 1274 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 B3GALNT2Q8NCR0 500 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 MCUQ8NE86 351 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 HSFY1Q96LI6 401 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 PARK7Q99497 189 aaKnown RBP12.38□□□□□ -0.43
TP53-227ENST00000622645 TSSK1BQ9BXA7 367 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 CEP41Q9BYV8 373 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 SLC13A1Q9BZW2 595 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 YY1AP1Q9H869 796 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 IPPQ9Y573 584 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 ZNF487B1APH4 448 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms