RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 C1orf127Q8N9H9 656 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 IFT43Q96FT9 208 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 KLC2Q9H0B6 622 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 MFHAS1Q9Y4C4 1052 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 COL4A5P29400 1685 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 MAGEC1O60732 1142 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 BPGMP07738 259 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 CD1EP15812 388 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 GPD1P21695 349 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 IL4RP24394 825 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 CMPK2Q5EBM0 449 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 PCDH19Q8TAB3 1148 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 ZNF778Q96MU6 729 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 C7orf26Q96N11 449 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 MINDY3Q9H8M7 445 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 NRBP2Q9NSY0 501 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 FAM49BQ9NUQ9 324 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 IRAK4Q9NWZ3 460 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 PAK5Q9P286 719 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 WDR81Q562E7 1941 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 A0A088AWK7 358 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 WDR27A2RRH5 827 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 CLCN3P51790 818 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 N4BP2L1Q5TBK1 243 aaPredicted RBP16.31■□□□□ 0.2
NPHP4-211ENST00000622020 RNF111Q6ZNA4 994 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 CYP4V2Q6ZWL3 525 aaPredicted RBP16.31■□□□□ 0.2
NPHP4-211ENST00000622020 NET1Q7Z628 596 aaPredicted RBP16.31■□□□□ 0.2
NPHP4-211ENST00000622020 SIRPGQ9P1W8 387 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 ABLIM1O14639 778 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 CHADO15335 359 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 GPD2P43304 727 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 PHKA2P46019 1235 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 RPS6KA3P51812 740 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 ENPEPQ07075 957 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 TRMT5Q32P41 509 aaKnown RBP16.31■□□□□ 0.2
NPHP4-211ENST00000622020 SFT2D3Q587I9 215 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 XRRA1Q6P2D8 792 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 MYLK4Q86YV6 388 aaPredicted RBP16.31■□□□□ 0.2
NPHP4-211ENST00000622020 HPS6Q86YV9 775 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 PQLC3Q8N755 202 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 FAM172AQ8WUF8 416 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 TMEM176AQ96HP8 235 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 BTBD7Q9P203 1132 aa16.31■□□□□ 0.2
NPHP4-211ENST00000622020 APOL1O14791 398 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 PEX2P28328 305 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 ZNF143P52747 638 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-211ENST00000622020 OLIG2Q13516 323 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 TAZQ16635 292 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 ATF7IP2Q5U623 682 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 CLMNQ96JQ2 1002 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 R3HDMLQ9H3Y0 253 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 TMEM134Q9H6X4 195 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 AQP4P55087 323 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 TFDP2Q14188 446 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 JADE1Q6IE81 842 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 ZPBP2Q6X784 338 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 ZNF280CQ8ND82 737 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 OXCT2Q9BYC2 517 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-211ENST00000622020 RNPEPQ9H4A4 650 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 ADAMTS6Q9UKP5 1117 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 SOX13Q9UN79 622 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 PSAT1Q9Y617 370 aa16.3■□□□□ 0.2
NPHP4-211ENST00000622020 SYNJ2BP-COX16A0A087WUM0 186 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 LACTBL1A8MY62 500 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 IQCF3P0C7M6 154 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 USP4Q13107 963 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 HSDL1Q3SXM5 330 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 FKBP1CQ5VVH2 108 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 WDR75Q8IWA0 830 aaKnown RBP16.29■□□□□ 0.2
NPHP4-211ENST00000622020 ZBTB8OSQ8IWT0 167 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 FNIP1Q8TF40 1166 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 CPB2Q96IY4 423 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 DHX35Q9H5Z1 703 aaKnown RBP16.29■□□□□ 0.2
NPHP4-211ENST00000622020 RPF1Q9H9Y2 349 aaKnown RBP16.29■□□□□ 0.2
NPHP4-211ENST00000622020 PICK1Q9NRD5 415 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 COX16Q9P0S2 106 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 TSPAN16Q9UKR8 245 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 APOBEC2Q9Y235 224 aaKnown RBP16.29■□□□□ 0.2
NPHP4-211ENST00000622020 TPP1O14773 563 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 KLF11O14901 512 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 CYP3A5P20815 502 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 RXRBP28702 533 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 SLC1A6P48664 564 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 NDST1P52848 882 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 PGGT1BP53609 377 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 SLC10A2Q12908 348 aaPredicted RBP16.29■□□□□ 0.2
NPHP4-211ENST00000622020 DLG1Q12959 904 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 TRIP10Q15642 601 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 EML3Q32P44 896 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 MFN1Q8IWA4 741 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 DEFB107AQ8IZN7 70 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.29■□□□□ 0.2
NPHP4-211ENST00000622020 SNRNP25Q9BV90 132 aaKnown RBP16.29■□□□□ 0.2
NPHP4-211ENST00000622020 LHX5Q9H2C1 402 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 SEPT10Q9P0V9 454 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 FARP2O94887 1054 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms