RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 HCRTO43612 131 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 DNAJC6O75061 913 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 DGKIO75912 1065 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 TROVE2P10155 538 aaKnown RBP eCLIP9.77□□□□□ -0.85
PDPN-212ENST00000621990 PYGBP11216 843 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 CCDC130P13994 396 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 LMO2P25791 158 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 GNL1P36915 607 aaPredicted RBP9.77□□□□□ -0.85
PDPN-212ENST00000621990 TMEM62Q0P6H9 643 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 CCL15Q16663 113 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 FAM110CQ1W6H9 321 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 GLRA4Q5JXX5 417 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 NCBP2-AS2Q69YL0 99 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 UNC5AQ6ZN44 842 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 NLRP9Q7RTR0 991 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 CCDC91Q7Z6B0 441 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 RPAINQ86UA6 219 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 NT5C3BQ969T7 300 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 SLC7A6OSQ96CW6 309 aaPredicted RBP9.77□□□□□ -0.85
PDPN-212ENST00000621990 MTBPQ96DY7 904 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 KLF6Q99612 283 aaPredicted RBP9.77□□□□□ -0.85
PDPN-212ENST00000621990 FAM49AQ9H0Q0 323 aaPredicted RBP9.77□□□□□ -0.85
PDPN-212ENST00000621990 C12orf65Q9H3J6 166 aaKnown RBP9.77□□□□□ -0.85
PDPN-212ENST00000621990 XAB2Q9HCS7 855 aaKnown RBP9.77□□□□□ -0.85
PDPN-212ENST00000621990 NPHS2Q9NP85 383 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 LNPEPQ9UIQ6 1025 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 MCM8Q9UJA3 840 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 SF3B1O75533 1304 aaKnown RBP eCLIP9.77□□□□□ -0.85
PDPN-212ENST00000621990 HACD1B0YJ81 288 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 XPO1O14980 1071 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 HNRNPCL1O60812 293 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 KRT37O76014 449 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SNRPAP09012 282 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 MATKP42679 507 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 ATXN1P54253 815 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 HIC1Q14526 733 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SYCP2LQ5T4T6 812 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 FAXCQ5TGI0 409 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 KCNT2Q6UVM3 1135 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 PLEKHH3Q7Z736 793 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 CLNKQ7Z7G1 428 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 CCDC185Q8N715 623 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 NPLOC4Q8TAT6 608 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 GSDMBQ8TAX9 411 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 THOC1Q96FV9 657 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 CFAP36Q96G28 342 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 EBNA1BP2Q99848 306 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 DNAI2Q9GZS0 605 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TLE6Q9H808 572 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SPON1Q9HCB6 807 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SMYD2Q9NRG4 433 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDPN-212ENST00000621990 DTLQ9NZJ0 730 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 NUMBLQ9Y6R0 609 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 HAS3O00219 553 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 XPOTO43592 962 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 RFPL1O75677 317 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 FAM163BP0C2L3 166 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 MLNP12872 115 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 EZRP15311 586 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 WARSP23381 471 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 CCND1P24385 295 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TARSP26639 723 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 CDK16Q00536 496 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SNX17Q15036 470 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SLC25A52Q3SY17 297 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 EFHC1Q5JVL4 640 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 OTUD1Q5VV17 481 aaPredicted RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 STEAP4Q687X5 459 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 CEP57Q86XR8 500 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 HACE1Q8IYU2 909 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TOP6BLQ8N6T0 577 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SLC2A14Q8TDB8 520 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 AGAP11Q8TF27 550 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TMEM40Q8WWA1 233 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 FAM111AQ96PZ2 611 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SRPK1Q96SB4 655 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 HNRNPABQ99729 332 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 TSSK1BQ9BXA7 367 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 DHX35Q9H5Z1 703 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 KCNK13Q9HB14 408 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 FZD10Q9ULW2 581 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TRIM49D1C9J1S8 452 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 ALDH1A2O94788 518 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 DLDP09622 509 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 CYP2C9P11712 490 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 AKAP5P24588 427 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 ADORA2BP29275 332 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 SERPINB4P48594 390 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TAF6P49848 677 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 MRPS5P82675 430 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 SOX4Q06945 474 aaPredicted RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 SV2CQ496J9 727 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TAF1BQ53T94 588 aaPredicted RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 ZNF618Q5T7W0 954 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 LGSNQ5TDP6 509 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TIFABQ6ZNK6 161 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 CDHR3Q6ZTQ4 885 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 PPM1NQ8N819 430 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms