RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RBP3P10745 1247 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 ETS1P14921 441 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 ZFXP17010 805 aaPredicted RBP22.28■■□□□ 1.16
SPAST-204ENST00000621856 HSD17B3P37058 310 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 GGCXP38435 758 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 GPR15P49685 360 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 ROR1Q01973 937 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 CAV1Q03135 178 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 SDHAF4Q5VUM1 108 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 IZUMO3Q5VZ72 239 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 BTBD8Q5XKL5 378 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 TMEM199Q8N511 208 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 ATAD1Q8NBU5 361 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 TOP1MTQ969P6 601 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 PGAP3Q96FM1 320 aaPredicted RBP22.28■■□□□ 1.16
SPAST-204ENST00000621856 ZIM3Q96PE6 472 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 CSPG4P5Q96PW8 444 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 SLC9A7Q96T83 725 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 OXCT2Q9BYC2 517 aaPredicted RBP22.28■■□□□ 1.16
SPAST-204ENST00000621856 C10orf88Q9H8K7 445 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 PCDH9Q9HC56 1237 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.28■■□□□ 1.16
SPAST-204ENST00000621856 ATP8A1Q9Y2Q0 1164 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 HEY1Q9Y5J3 304 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 H3BRJ5 948 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 H7C0C1 242 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 PPFIA2O75334 1257 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 ATP5OP48047 213 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 P3H1Q32P28 736 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 DARS2Q6PI48 645 aaKnown RBP22.28■■□□□ 1.16
SPAST-204ENST00000621856 PRSS55Q6UWB4 352 aaPredicted RBP22.28■■□□□ 1.16
SPAST-204ENST00000621856 NUP93Q8N1F7 819 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 GLIS1Q8NBF1 620 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 MED4Q9NPJ6 270 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 TMPRSS4Q9NRS4 437 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 CWC15Q9P013 229 aaKnown RBP22.28■■□□□ 1.16
SPAST-204ENST00000621856 RCOR3Q9P2K3 495 aaPredicted RBP22.28■■□□□ 1.16
SPAST-204ENST00000621856 KIAA0100Q14667 2235 aaKnown RBP22.27■■□□□ 1.16
SPAST-204ENST00000621856 EFCAB14O75071 495 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 HSPA1AP0DMV8 641 aaKnown RBP22.27■■□□□ 1.16
SPAST-204ENST00000621856 HSPA1BP0DMV9 641 aaKnown RBP22.27■■□□□ 1.16
SPAST-204ENST00000621856 AIF1P55008 147 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 DEFB103AP81534 67 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 GPS1Q13098 491 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 GPR17Q13304 367 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 MFSD5Q6N075 450 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 RSPO2Q6UXX9 243 aaPredicted RBP22.27■■□□□ 1.16
SPAST-204ENST00000621856 BEND5Q7L4P6 421 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 TMCO2Q7Z6W1 182 aaPredicted RBP22.27■■□□□ 1.16
SPAST-204ENST00000621856 TAC4Q86UU9 113 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 ZC3H18Q86VM9 953 aaKnown RBP22.27■■□□□ 1.16
SPAST-204ENST00000621856 SPPL2BQ8TCT7 592 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 NTAN1Q96AB6 310 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 WDR6Q9NNW5 1121 aaKnown RBP22.27■■□□□ 1.16
SPAST-204ENST00000621856 ABCC13Q9NSE7 274 aa22.27■■□□□ 1.16
SPAST-204ENST00000621856 COL4A6Q14031 1691 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 MTMR11A4FU01 709 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 AGPSO00116 658 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 TBC1D4O60343 1298 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 GOT1P17174 413 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 ADRA1BP35368 520 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 SMARCB1Q12824 385 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 UAP1Q16222 522 aaPredicted RBP22.26■■□□□ 1.15
SPAST-204ENST00000621856 USP41Q3LFD5 358 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 ARL13BQ3SXY8 428 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 CCDC25Q86WR0 208 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 TTC9BQ8N6N2 239 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 STKLD1Q8NE28 680 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 DQX1Q8TE96 717 aaKnown RBP22.26■■□□□ 1.15
SPAST-204ENST00000621856 IGSF21Q96ID5 467 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 TXLNGYQ9BZA5 131 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 FBXO44Q9H4M3 255 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 FBXW11Q9UKB1 542 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 PLAAQ9Y263 795 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 COL4A4P53420 1690 aaPredicted RBP22.26■■□□□ 1.15
SPAST-204ENST00000621856 DNALI1O14645 258 aaPredicted RBP22.26■■□□□ 1.15
SPAST-204ENST00000621856 ACRP10323 421 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 CAPN2P17655 700 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 AMPD1P23109 780 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 PMS2P54278 862 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 WDR5P61964 334 aaKnown RBP22.26■■□□□ 1.15
SPAST-204ENST00000621856 MGAT5BQ3V5L5 792 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 KCNT2Q6UVM3 1135 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 RNF19BQ6ZMZ0 732 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 UNC45BQ8IWX7 931 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 IQCKQ8N0W5 287 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 GOLGA6L1Q8N7Z2 621 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 RNF139Q8WU17 664 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 RIN2Q8WYP3 895 aaPredicted RBP22.26■■□□□ 1.15
SPAST-204ENST00000621856 PIK3R5Q8WYR1 880 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 RNF34Q969K3 372 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 ZNF558Q96NG5 402 aa22.26■■□□□ 1.15
SPAST-204ENST00000621856 SEPT5Q99719 369 aaPredicted RBP22.26■■□□□ 1.15
SPAST-204ENST00000621856 CREB3O43889 395 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 OPA1O60313 960 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 GDF10P55107 478 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 SLMAPQ14BN4 828 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 KIAA1841Q6NSI8 718 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 RHBDF2Q6PJF5 856 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 FAM71DQ8N9W8 422 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms