RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 CEP41Q9BYV8 373 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 TRPC7Q9HCX4 862 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 TMED5Q9Y3A6 229 aa11.09□□□□□ -0.63
CDH1-214ENST00000621016 VTNP04004 478 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 F7P08709 466 aaPredicted RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 ARL2P36404 184 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 PHKA2P46019 1235 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 TRPC1P48995 793 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 RNASEH2BQ5TBB1 312 aaKnown RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 TMCO4Q5TGY1 634 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 CASC4Q6P4E1 433 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 RBM44Q6ZP01 1051 aaKnown RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 LRRC74BQ6ZQY2 392 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 MARK2Q7KZI7 788 aaKnown RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 PRR11Q96HE9 360 aaPredicted RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 FAM192AQ9GZU8 254 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 PSMC3IPQ9P2W1 217 aaPredicted RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 ZFP69BQ9UJL9 534 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 ATAD5Q96QE3 1844 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 E7ENQ6 273 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 NFKBIEO00221 500 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 MCF2LO15068 1137 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 TOP3BO95985 862 aaKnown RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 ERBB2P04626 1255 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 INHBAP08476 426 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 PDGFRAP16234 1089 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 KRT81Q14533 505 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 C16orf72Q14CZ0 275 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 ATF7IP2Q5U623 682 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 EFCAB12Q6NXP0 572 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 CATSPERGQ6ZRH7 1159 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 ANKRD36BP1Q96IX9 119 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 SH3GL1Q99961 368 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 CCDC134Q9H6E4 229 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 AKT3Q9Y243 479 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 MAFBQ9Y5Q3 323 aaPredicted RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 MRPL42Q9Y6G3 142 aaKnown RBP11.08□□□□□ -0.64
CDH1-214ENST00000621016 CLUHO75153 1309 aa11.08□□□□□ -0.64
CDH1-214ENST00000621016 KCNN4O15554 427 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 LPXNO60711 386 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 RNASEH1O60930 286 aaKnown RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 FARP2O94887 1054 aaPredicted RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 BGNP21810 368 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 GRIA2P42262 883 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 FAAP100Q0VG06 881 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 PIGHQ14442 188 aaPredicted RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 PLEKHG4Q58EX7 1191 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 GLRA4Q5JXX5 417 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 NLRP9Q7RTR0 991 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 SESTD1Q86VW0 696 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 BRSK2Q8IWQ3 736 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 SULF1Q8IWU6 871 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 RDM1Q8NG50 284 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 SEPT1Q8WYJ6 367 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 RPF1Q9H9Y2 349 aaKnown RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 HEY2Q9UBP5 337 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 KBTBD13C9JR72 458 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 OGTO15294 1046 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 MSCO60682 206 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 ADAM23O75077 832 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 UNC5CO95185 931 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 KDELR1P24390 212 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 TKTP29401 623 aaKnown RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 CRADDP78560 199 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 ANKDD1AQ495B1 522 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 FYB2Q5VWT5 728 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 TTC7BQ86TV6 843 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 TTC30BQ8N4P2 665 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 PPP1R10Q96QC0 940 aaKnown RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 B3GNT5Q9BYG0 378 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 USP18Q9UMW8 372 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 SSX2IPQ9Y2D8 614 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 UGT1A9O60656 530 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 PORP16435 677 aaPredicted RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 PCSK6P29122 969 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 POLR2BP30876 1174 aaKnown RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 PTK7Q13308 1070 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 ATP1A4Q13733 1029 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 MORF4L2Q15014 288 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 ASRGL1Q7L266 308 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 APLFQ8IW19 511 aaPredicted RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 REPS2Q8NFH8 660 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 CCDC110Q8TBZ0 833 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 STMN2Q93045 179 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 ACO2Q99798 780 aaKnown RBP11.07□□□□□ -0.64
CDH1-214ENST00000621016 SHCBP1LQ9BZQ2 653 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 ELP3Q9H9T3 547 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 UGT1A7Q9HAW7 530 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 UGT1A10Q9HAW8 530 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 UGT1A8Q9HAW9 530 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 IL1RAPL1Q9NZN1 696 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 CARD8Q9Y2G2 431 aa11.07□□□□□ -0.64
CDH1-214ENST00000621016 CYB561D2O14569 222 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 HCRTO43612 131 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 OAS1P00973 400 aaKnown RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 IQCF3P0C7M6 154 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 RASSF2P50749 326 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms