RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 PCYT2Q99447 389 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 CNPY3Q9BT09 278 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 HEY1Q9Y5J3 304 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 C2CD4BA6NLJ0 364 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 MAP3K6O95382 1288 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 FGF3P11487 239 aaPredicted RBP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 HMGB2P26583 209 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 EFNA5P52803 228 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 PTPN11Q06124 597 aaPredicted RBP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 BTKQ06187 659 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 ASPHQ12797 758 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 LAMB3Q13751 1172 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 DBN1Q16643 649 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 LPCAT4Q643R3 524 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 WDR75Q8IWA0 830 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 TMEM130Q8N3G9 435 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 EBNA1BP2Q99848 306 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 ELOVL4Q9GZR5 314 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 EMCNQ9ULC0 261 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 M0QYV0 167 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 SORBS2O94875 1100 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 UQCRBP14927 111 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 TGM2P21980 687 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 GPD2P43304 727 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 KRT81Q14533 505 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 LRRC36Q1X8D7 754 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 DPY19L2Q6NUT2 758 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 DENND5BQ6ZUT9 1274 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 PPP1R14CQ8TAE6 165 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 RXFP2Q8WXD0 754 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 ANKRD36BP1Q96IX9 119 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 OLFM3Q96PB7 478 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 HAPLN3Q96S86 360 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 EPAS1Q99814 870 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 STN1Q9H668 368 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 GPATCH2LQ9NWQ4 482 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 TRPC5Q9UL62 973 aaPredicted RBP20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 MAD1L1Q9Y6D9 718 aa20.24■□□□□ 0.83
PDLIM3-212ENST00000620787 PRPSAP2O60256 369 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 SIN3BO75182 1162 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 KLHL2O95198 593 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 PRKCBP05771 671 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 GRIA2P42262 883 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 AQP4P55087 323 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 GRM2Q14416 872 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 ZNF667Q5HYK9 610 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 C16orf46Q6P387 395 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 MAVSQ7Z434 540 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 NCAPG2Q86XI2 1143 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 PIWIL1Q96J94 861 aaKnown RBP20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 KLHL4Q9C0H6 718 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 SIX4Q9UIU6 781 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 ITGA11Q9UKX5 1188 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 PCDHA11Q9Y5I1 949 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 SSC5DA1L4H1 1573 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 APOL1O14791 398 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 B4GALT4O60513 344 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 CSDE1O75534 798 aaKnown RBP20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 PDE5AO76074 875 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 KRT19P08727 400 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 COPAP53621 1224 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 BCAR1P56945 870 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 RPL10AP62906 217 aaKnown RBP20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 CDO1Q16878 200 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 STXBP5Q5T5C0 1151 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 TTLL6Q8N841 843 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 SLC26A7Q8TE54 656 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 DEPDC1BQ8WUY9 529 aa20.23■□□□□ 0.83
PDLIM3-212ENST00000620787 MAFO75444 373 aaPredicted RBP20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 METTL18O95568 372 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 PDGFRAP16234 1089 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 PEX2P28328 305 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 SLC1A6P48664 564 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 EPHB1P54762 984 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 OSTNP61366 133 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 MED21Q13503 144 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 TMEM132BQ14DG7 1078 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 SLC9A4Q6AI14 798 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 ATG14Q6ZNE5 492 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 PCDH19Q8TAB3 1148 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 ACTRT2Q8TDY3 377 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 VCX3BQ9H321 246 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 VCX3AQ9NNX9 186 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 APOBEC2Q9Y235 224 aaKnown RBP20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 DOCK1Q14185 1865 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 PIK3R2O00459 728 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 PABPC4LP0CB38 370 aaKnown RBP20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 ICAM3P32942 547 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 OAZ1P54368 228 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 XIAPP98170 497 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 FSTL1Q12841 308 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 PDK2Q15119 407 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 ARHGAP22Q7Z5H3 698 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 MAP7D3Q8IWC1 876 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 GDPD5Q8WTR4 605 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 JADE3Q92613 823 aa20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 ZNF277Q9NRM2 450 aaPredicted RBP20.22■□□□□ 0.83
PDLIM3-212ENST00000620787 MOCS1Q9NZB8 636 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms