RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ALCAMQ13740 583 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PARP6Q2NL67 630 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PPM1LQ5SGD2 360 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 LRRC71Q8N4P6 559 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ASPSCR1Q9BZE9 553 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PARVAQ9NVD7 372 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 FEN1P39748 380 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 BCAR1P56945 870 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 NAALADL2Q58DX5 795 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PACS1Q6VY07 963 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 AHI1Q8N157 1196 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 UBA3Q8TBC4 463 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 LRTOMTQ8WZ04 291 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 GFM1Q96RP9 751 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PLAGL2Q9UPG8 496 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 MROH5Q6ZUA9 1318 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 NUPL2O15504 423 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 HOXD11P31277 338 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 TLR1Q15399 786 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ZC3H12AQ5D1E8 599 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ZCCHC8Q6NZY4 707 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SCIMPQ6UWF3 145 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PLEKHM3Q6ZWE6 761 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 NSUN6Q8TEA1 469 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 RCN3Q96D15 328 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 KLHL31Q9H511 634 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF395Q9H8N7 513 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 VTA1Q9NP79 307 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 DIABLOQ9NR28 239 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 UBAP1LF5GYI3 381 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 B3GALNT1O75752 331 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 FADS2O95864 444 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF806P0C7X5 589 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ITGALP20701 1170 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 NAMPTP43490 491 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ATP12AP54707 1039 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 CD83Q01151 205 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SMUG1Q53HV7 270 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 MREGQ8N565 214 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SCAIQ8N9R8 606 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 TMIGD2Q96BF3 282 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 OTUD5Q96G74 571 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PLEKHA8Q96JA3 519 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 CXorf21Q9HAI6 301 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SSU72P8A0A1W2PR75 194 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 APOL1O14791 398 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 EIF2S1P05198 315 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 OR2B6P58173 313 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ZMYND11Q15326 602 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 UBE3CQ15386 1083 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ATP13A4Q4VNC1 1196 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 STRA8Q7Z7C7 330 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 CBR4Q8N4T8 237 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 FAM84AQ96KN4 292 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PNPLA3Q9NST1 481 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 WNT7AO00755 349 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PSME3P61289 254 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 KLRC3Q07444 240 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CLEC10AQ8IUN9 316 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TMEM47Q9BQJ4 181 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ABCB9Q9NP78 766 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CNOT7Q9UIV1 285 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 NUDT5Q9UKK9 219 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 LRRC42Q9Y546 428 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 KDM5DQ9BY66 1539 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PNMA6FA0A0J9YX94 578 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 A0A1W2PRG6 482 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CLRN2A0PK11 232 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 RPL10P27635 214 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PLK1P53350 603 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CDC16Q13042 620 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SPPL2CQ8IUH8 684 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PRR11Q96HE9 360 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CIB1Q99828 191 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SERPINB2P05120 415 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SNRPD2P62316 118 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TNFAIP2Q03169 654 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 OR7A2PQ8NGA2 310 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 VAT1Q99536 393 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 EML4Q9HC35 981 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 MALT1Q9UDY8 824 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 EBF1Q9UH73 591 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CPDO75976 1380 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 IFT140Q96RY7 1462 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 GRB10Q13322 594 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FAM102AQ5T9C2 384 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CAMKK1Q8N5S9 505 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 OR9Q1Q8NGQ5 310 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FAM172AQ8WUF8 416 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SMIM22K7EJ46 135 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 AREL1O15033 823 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 S100A9P06702 114 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 RASA1P20936 1047 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ATP6V1E1P36543 226 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 GRIA3P42263 894 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 MIIPQ5JXC2 388 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FBXO11Q86XK2 927 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TTC30BQ8N4P2 665 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FAM49AQ9H0Q0 323 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CASS4Q9NQ75 786 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms