RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 WDR35Q9P2L0 1181 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 EPS15L1Q9UBC2 864 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 SALL4Q9UJQ4 1053 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 PCDHA13Q9Y5I0 950 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 NUMBLQ9Y6R0 609 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 DUSP10Q9Y6W6 482 aa14.24□□□□□ -0.13
NEK3-210ENST00000620675 COL4A3Q01955 1670 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 SLC12A8A0AV02 714 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 TRUB2O95900 331 aaKnown RBP14.23□□□□□ -0.13
NEK3-210ENST00000620675 CYP1A2P05177 515 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 PTMAP06454 111 aaKnown RBP14.23□□□□□ -0.13
NEK3-210ENST00000620675 GLI1P08151 1106 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 DDX6P26196 483 aaKnown RBP eCLIP14.23□□□□□ -0.13
NEK3-210ENST00000620675 SCNN1AP37088 669 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 GPC5P78333 572 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 ATP11AP98196 1134 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 CDO1Q16878 200 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 CCDC14Q49A88 953 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 ATXN2LQ8WWM7 1075 aaKnown RBP14.23□□□□□ -0.13
NEK3-210ENST00000620675 GOLGA1Q92805 767 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 ZFYVE19Q96K21 471 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 NPY6RQ99463 290 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 DDX23Q9BUQ8 820 aaKnown RBP14.23□□□□□ -0.13
NEK3-210ENST00000620675 NUP85Q9BW27 656 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 SMOC2Q9H3U7 446 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 TMPRSS4Q9NRS4 437 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.23□□□□□ -0.13
NEK3-210ENST00000620675 DNMT3LQ9UJW3 386 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 DOCK4Q8N1I0 1966 aa14.23□□□□□ -0.13
NEK3-210ENST00000620675 HEPACAM2A8MVW5 462 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 LOC730098B7Z3J9 87 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 I6L893 689 aaPredicted RBP14.22□□□□□ -0.13
NEK3-210ENST00000620675 LEFTY2O00292 366 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 GREM1O60565 184 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 IGLV3-25P01717 112 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 KLKB1P03952 638 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 PDGFRAP16234 1089 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 NOS2P35228 1153 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 HTR4Q13639 388 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 GRM2Q14416 872 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 PUS10Q3MIT2 529 aaKnown RBP14.22□□□□□ -0.13
NEK3-210ENST00000620675 KLHDC10Q6PID8 442 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 VITQ6UXI7 678 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 ZNF276Q8N554 614 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 NT5C3BQ969T7 300 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 ACSF2Q96CM8 615 aaPredicted RBP14.22□□□□□ -0.13
NEK3-210ENST00000620675 ASIC4Q96FT7 647 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 ANLNQ9NQW6 1124 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 PIGVQ9NUD9 493 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 PARVAQ9NVD7 372 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 CFAP97Q9P2B7 532 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 TRIM10Q9UDY6 481 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 ARHGAP26Q9UNA1 814 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 CUL9Q8IWT3 2517 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 TMEM191CA6NGB0 347 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 ANHXE9PGG2 379 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 STC2O76061 302 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 TMEM253P0C7T8 217 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 SULT1E1P49888 294 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 NME3Q13232 169 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 EIF4EBP2Q13542 120 aaPredicted RBP14.22□□□□□ -0.13
NEK3-210ENST00000620675 ZNF77Q15935 545 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 DCUN1D2Q6PH85 259 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.22□□□□□ -0.13
NEK3-210ENST00000620675 ADHFE1Q8IWW8 467 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 ARFGAP1Q8N6T3 406 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 CTNNBL1Q8WYA6 563 aaPredicted RBP14.22□□□□□ -0.13
NEK3-210ENST00000620675 MAGEB5Q9BZ81 275 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 TRPV4Q9HBA0 871 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 DDIT4Q9NX09 232 aa14.22□□□□□ -0.13
NEK3-210ENST00000620675 XPO7Q9UIA9 1087 aaKnown RBP14.22□□□□□ -0.13
NEK3-210ENST00000620675 M0QYT0 321 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 IRAK2O43187 625 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 CCP110O43303 1012 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 CCDC173Q0VFZ6 552 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 SPA17Q15506 151 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 BEND5Q7L4P6 421 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 BNIPLQ7Z465 357 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 SLC35G2Q8TBE7 412 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 P2RY11Q96G91 374 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 LINC00597Q9H2U6 94 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 FAM204AQ9H8W3 233 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 KCNK12Q9HB15 430 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 ZFP14Q9HCL3 533 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 ADGRG1Q9Y653 693 aa14.21□□□□□ -0.13
NEK3-210ENST00000620675 MYO18AQ92614 2054 aaKnown RBP14.21□□□□□ -0.13
NEK3-210ENST00000620675 ARHGAP6O43182 974 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 MYBL1P10243 752 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 TCF4P15884 667 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 GPD1P21695 349 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 USP4Q13107 963 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 SLC25A52Q3SY17 297 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 ZC3H12AQ5D1E8 599 aaKnown RBP14.21□□□□□ -0.14
NEK3-210ENST00000620675 TRIM68Q6AZZ1 485 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 PPP1R2P3Q6NXS1 205 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 CCDC112Q8NEF3 446 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 ZNF564Q8TBZ8 553 aaPredicted RBP14.21□□□□□ -0.14
NEK3-210ENST00000620675 NUP205Q92621 2012 aa14.21□□□□□ -0.14
NEK3-210ENST00000620675 TRIM11Q96F44 468 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms