RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 INTS2Q9H0H0 1204 aaKnown RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 SMOC1Q9H4F8 434 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 CDV3Q9UKY7 258 aaKnown RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 AGO1Q9UL18 857 aaKnown RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 CACNA1AO00555 2505 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.98■□□□□ 0.47
HMGN3-203ENST00000620514 YJEFN3A6XGL0 299 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 PRRT4C9JH25 899 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 E7ENQ6 273 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 PIK3R2O00459 728 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 CISD3P0C7P0 127 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 SETSIPP0DME0 302 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 LCP1P13796 627 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 BCKDHBP21953 392 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 GBP1P32455 592 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 FOXK2Q01167 660 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 PREPLQ4J6C6 727 aaPredicted RBP17.98■□□□□ 0.47
HMGN3-203ENST00000620514 USP39Q53GS9 565 aaKnown RBP17.98■□□□□ 0.47
HMGN3-203ENST00000620514 EGFLAMQ63HQ2 1017 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 SIX6OS1Q8N1H7 587 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 KCTD13Q8WZ19 329 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 EDEM1Q92611 657 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 IPO9Q96P70 1041 aaKnown RBP17.98■□□□□ 0.47
HMGN3-203ENST00000620514 ACOX2Q99424 681 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 RWDD2AQ9UIY3 292 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 STRIP2Q9ULQ0 834 aa17.98■□□□□ 0.47
HMGN3-203ENST00000620514 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.98■□□□□ 0.47
HMGN3-203ENST00000620514 MYO18AQ92614 2054 aaKnown RBP17.98■□□□□ 0.47
HMGN3-203ENST00000620514 DNAH14Q0VDD8 3507 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 TCRBV21S2A2A0A5A6 115 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 MED19A0JLT2 244 aaPredicted RBP17.97■□□□□ 0.47
HMGN3-203ENST00000620514 M0QYV0 167 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 ALDH1A2O94788 518 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 DGKGP49619 791 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 ZNF132P52740 706 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 GCNT1Q02742 428 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 CNGA2Q16280 664 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 BSPRYQ5W0U4 402 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 PMF1Q6P1K2 205 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 DENND1CQ8IV53 801 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 OLIG1Q8TAK6 271 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 SLC35F5Q8WV83 523 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 HMGB4Q8WW32 186 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 RLN3Q8WXF3 142 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 ERLEC1Q96DZ1 483 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 DCLK3Q9C098 648 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 POLMQ9NP87 494 aaPredicted RBP17.97■□□□□ 0.47
HMGN3-203ENST00000620514 SFMBT1Q9UHJ3 866 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 ZNF510Q9Y2H8 683 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 STARD13Q9Y3M8 1113 aa17.97■□□□□ 0.47
HMGN3-203ENST00000620514 DCDC2BA2VCK2 349 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 RHOBTB1O94844 696 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 PENKP01210 267 aaPredicted RBP17.96■□□□□ 0.47
HMGN3-203ENST00000620514 SDHBP21912 280 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 MPLP40238 635 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 DAOAP59103 153 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 ELF2Q15723 593 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 PLA2G2CQ5R387 149 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 FYB2Q5VWT5 728 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 NUDT18Q6ZVK8 323 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 CREBRFQ8IUR6 639 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 FMNL3Q8IVF7 1028 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 FRMD1Q8N878 549 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 NETO1Q8TDF5 533 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 KCNV2Q8TDN2 545 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 CRACR2AQ9BSW2 395 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 CNGB3Q9NQW8 809 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 RXFP3Q9NSD7 469 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 BCCIPQ9P287 314 aaKnown RBP eCLIP17.96■□□□□ 0.47
HMGN3-203ENST00000620514 FBXO10Q9UK96 956 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 ABCA7Q8IZY2 2146 aa17.96■□□□□ 0.47
HMGN3-203ENST00000620514 FGFR1OPO95684 399 aaKnown RBP17.95■□□□□ 0.46
HMGN3-203ENST00000620514 ZNF806P0C7X5 589 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 HOXB2P14652 356 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 NTSR1P30989 418 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 CREB5Q02930 508 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 TRIP4Q15650 581 aaPredicted RBP17.95■□□□□ 0.46
HMGN3-203ENST00000620514 PMS2CLQ68D20 193 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 GJB7Q6PEY0 223 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 TRMT11Q7Z4G4 463 aaKnown RBP17.95■□□□□ 0.46
HMGN3-203ENST00000620514 IRF2BP1Q8IU81 584 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 CLEC4CQ8WTT0 213 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 PLD4Q96BZ4 506 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 RTKNQ9BST9 563 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 UBE2TQ9NPD8 197 aaPredicted RBP17.95■□□□□ 0.46
HMGN3-203ENST00000620514 OLA1Q9NTK5 396 aaKnown RBP17.95■□□□□ 0.46
HMGN3-203ENST00000620514 CLEC4EQ9ULY5 219 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 PCDHGA5Q9Y5G8 931 aa17.95■□□□□ 0.46
HMGN3-203ENST00000620514 A0A1W2PQF6 199 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 SLC30A4O14863 429 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 MSI1O43347 362 aaKnown RBP17.94■□□□□ 0.46
HMGN3-203ENST00000620514 KRT5P13647 590 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 CHKAP35790 457 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 P2RY2P41231 377 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 APBA1Q02410 837 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 STILQ15468 1287 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 AASDHQ4L235 1098 aaPredicted RBP17.94■□□□□ 0.46
HMGN3-203ENST00000620514 TCEAL6Q6IPX3 200 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 CHPFQ8IZ52 775 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms