RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 TBX18O95935 607 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 ITPKAP23677 461 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 TNFRSF4P43489 277 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 KDSRQ06136 332 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 DUOXA1Q1HG43 343 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 PGBD3Q8N328 593 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 JAKMIP2Q96AA8 810 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 SLC6A14Q9UN76 642 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 COQ4Q9Y3A0 265 aa23.2■■□□□ 1.3
SRRT-218ENST00000620394 ADAM23O75077 832 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 TULP3O75386 442 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 IRF1P10914 325 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 ATP5C1P36542 298 aaKnown RBP23.19■■□□□ 1.3
SRRT-218ENST00000620394 PSEN1P49768 467 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 NUCB2P80303 420 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 GFPT1Q06210 699 aaPredicted RBP23.19■■□□□ 1.3
SRRT-218ENST00000620394 HNRNPDQ14103 355 aaKnown RBP23.19■■□□□ 1.3
SRRT-218ENST00000620394 BECN1Q14457 450 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 TRMT11Q7Z4G4 463 aaKnown RBP23.19■■□□□ 1.3
SRRT-218ENST00000620394 SLC4A11Q8NBS3 891 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 KCNV2Q8TDN2 545 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 TIGD1Q96MW7 591 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 ARID3AQ99856 593 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 GTPBP4Q9BZE4 634 aaKnown RBP23.19■■□□□ 1.3
SRRT-218ENST00000620394 CISHQ9NSE2 258 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 MARK1Q9P0L2 795 aa23.19■■□□□ 1.3
SRRT-218ENST00000620394 A0A1W2PQH9 124 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 OPHN1O60890 802 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 SERPINF2P08697 491 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 PMS1P54277 932 aaKnown RBP23.18■■□□□ 1.3
SRRT-218ENST00000620394 RAD23BP54727 409 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 FKBP3Q00688 224 aaKnown RBP23.18■■□□□ 1.3
SRRT-218ENST00000620394 RPL6Q02878 288 aaKnown RBP23.18■■□□□ 1.3
SRRT-218ENST00000620394 LRRC63Q05C16 580 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 GOLGA8FQ08AF8 430 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 GOLGA8DPQ0D2H9 430 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 ZNF423Q2M1K9 1284 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 PREPLQ4J6C6 727 aaPredicted RBP23.18■■□□□ 1.3
SRRT-218ENST00000620394 CBWD6Q4V339 395 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 CBWD3Q5JTY5 395 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 CBWD5Q5RIA9 395 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 BTBD8Q5XKL5 378 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 ARHGAP17Q68EM7 881 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 SLC36A4Q6YBV0 504 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 SCD5Q86SK9 330 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 TMEM25Q86YD3 366 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 TERB1Q8NA31 727 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 TSG101Q99816 390 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 GTPBP2Q9BX10 602 aaKnown RBP23.18■■□□□ 1.3
SRRT-218ENST00000620394 CAPN10Q9HC96 672 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 DEC1Q9P2X7 70 aa23.18■■□□□ 1.3
SRRT-218ENST00000620394 FAM221BA6H8Z2 402 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 CACNG3O60359 315 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 SMC2O95347 1197 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 RARGP13631 454 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 ZNF394Q53GI3 561 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 EMC10Q5UCC4 262 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 Q6ZNB5 142 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 TMEM176AQ96HP8 235 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 CLIC5Q9NZA1 410 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 DNMT3LQ9UJW3 386 aa23.17■■□□□ 1.3
SRRT-218ENST00000620394 LSM7Q9UK45 103 aaKnown RBP23.17■■□□□ 1.3
SRRT-218ENST00000620394 FASNP49327 2511 aaKnown RBP23.16■■□□□ 1.3
SRRT-218ENST00000620394 GON4LQ3T8J9 2241 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 GOLGA6L4A6NEF3 574 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 ANO4Q32M45 955 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 DCAF17Q5H9S7 520 aaPredicted RBP23.16■■□□□ 1.3
SRRT-218ENST00000620394 RAB41Q5JT25 222 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 ANKRD40Q6AI12 368 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 TADA2BQ86TJ2 420 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 PROSER1Q86XN7 944 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 ELOA2Q8IYF1 753 aaPredicted RBP23.16■■□□□ 1.3
SRRT-218ENST00000620394 MINDY1Q8N5J2 469 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 SMARCE1Q969G3 411 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 SLC35C1Q96A29 364 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 HEXIM2Q96MH2 286 aaKnown RBP23.16■■□□□ 1.3
SRRT-218ENST00000620394 CDK5RAP1Q96SZ6 601 aaKnown RBP23.16■■□□□ 1.3
SRRT-218ENST00000620394 UBXN6Q9BZV1 441 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 ZDHHC4Q9NPG8 344 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 NAGPAQ9UK23 515 aa23.16■■□□□ 1.3
SRRT-218ENST00000620394 MDM4O15151 490 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 PLA2G4AP47712 749 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 ZNF513Q8N8E2 541 aaPredicted RBP23.15■■□□□ 1.3
SRRT-218ENST00000620394 NAT16Q8N8M0 369 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 TATDN2Q93075 761 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 FSCN3Q9NQT6 498 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 CALCOCO1Q9P1Z2 691 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 HCN2Q9UL51 889 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 STARD13Q9Y3M8 1113 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 ADAMTS20P59510 1910 aa23.15■■□□□ 1.3
SRRT-218ENST00000620394 TRIM49BA6NDI0 452 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 TBC1D3BA6NDS4 549 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 GABRG2P18507 467 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 ZNF33AQ06730 810 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 CUL2Q13617 745 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 C10orf120Q5SQS8 335 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 TCERG1LQ5VWI1 586 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 GRAMD4Q6IC98 578 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 NUDT18Q6ZVK8 323 aa23.14■■□□□ 1.29
SRRT-218ENST00000620394 RAB44Q7Z6P3 723 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms