RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 FAM161BQ96MY7 647 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 ACAP3Q96P50 834 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 TEX13BQ9BXU2 312 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 SMYD3Q9H7B4 428 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 MTMR10Q9NXD2 777 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 ITGA11Q9UKX5 1188 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 SBF1O95248 1867 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 A0A1B0GVG6 124 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 GAS2O43903 313 aaKnown RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 ALDOAP04075 364 aaKnown RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 CAPNS1P04632 268 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 GPD1P21695 349 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 CPA2P48052 419 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 CDK7P50613 346 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 ZBTB16Q05516 673 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 OLFML1Q6UWY5 402 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 ACMSDQ8TDX5 336 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 TMEM176AQ96HP8 235 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 NFKBIZQ9BYH8 718 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 PCDH18Q9HCL0 1135 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 RAB6BQ9NRW1 208 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 DNAJC28Q9NX36 388 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 SLC4A7Q9Y6M7 1214 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 CITO14578 2027 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 I3L4J1 428 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 PDLIM1O00151 329 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 GABBR2O75899 941 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 RNF8O76064 485 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 TOMM70O94826 608 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 RBL1P28749 1068 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 SEMA5AQ13591 1074 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 UBAP2LQ14157 1087 aaKnown RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 MAP1SQ66K74 1059 aaPredicted RBP13.54□□□□□ -0.24
SKP2-209ENST00000620197 ZBTB33Q86T24 672 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 PPM1NQ8N819 430 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 ACTRT2Q8TDY3 377 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 ZNF670Q9BS34 389 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 EPB41L1Q9H4G0 881 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 SOX13Q9UN79 622 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 USP3Q9Y6I4 520 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 IKBKGQ9Y6K9 419 aa13.54□□□□□ -0.24
SKP2-209ENST00000620197 H3BNX3 289 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 METTL18O95568 372 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 PRKCBP05771 671 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 SERPINB9P50453 376 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 CSRP3P50461 194 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 AP2B1P63010 937 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 PCLAFQ15004 111 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 LCLAT1Q6UWP7 414 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 IZUMO2Q6UXV1 221 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 TMEM192Q8IY95 271 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 TMEM130Q8N3G9 435 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 TAB3Q8N5C8 712 aaPredicted RBP13.53□□□□□ -0.24
SKP2-209ENST00000620197 SLC7A14Q8TBB6 771 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 CFAP36Q96G28 342 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 SPATA16Q9BXB7 569 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 CYP3A43Q9HB55 503 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 IL1RAPL1Q9NZN1 696 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 SCAF8Q9UPN6 1271 aaKnown RBP13.53□□□□□ -0.24
SKP2-209ENST00000620197 SF3B1O75533 1304 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■■■■ 67.1
SKP2-209ENST00000620197 SPECC1L-ADORA2AF8WAN1 911 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 ACKR2O00590 384 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 IL18RAPO95256 599 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 IQCF3P0C7M6 154 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 CDH6P55285 790 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 CDH8P55286 799 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 TMPRSS15P98073 1019 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 SP4Q02446 784 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 MBTD1Q05BQ5 628 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 STXBP2Q15833 593 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 FAM183BPQ6ZVS7 135 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 PPFIBP2Q8ND30 876 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 ZNF280CQ8ND82 737 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 CENPIQ92674 756 aaPredicted RBP13.53□□□□□ -0.24
SKP2-209ENST00000620197 PPP2R3CQ969Q6 453 aa13.53□□□□□ -0.24
SKP2-209ENST00000620197 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
SKP2-209ENST00000620197 SPDYE16A6NNV3 312 aaPredicted RBP13.52□□□□□ -0.24
SKP2-209ENST00000620197 ITM2AO43736 263 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 KRT38O76015 456 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 ATICP31939 592 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 RPL34P49207 117 aaKnown RBP13.52□□□□□ -0.24
SKP2-209ENST00000620197 HARS2P49590 506 aaKnown RBP13.52□□□□□ -0.24
SKP2-209ENST00000620197 SLC10A2Q12908 348 aaPredicted RBP13.52□□□□□ -0.24
SKP2-209ENST00000620197 TRPC3Q13507 836 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 BMPR2Q13873 1038 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 MXD4Q14582 209 aaPredicted RBP13.52□□□□□ -0.24
SKP2-209ENST00000620197 NUDCD3Q8IVD9 361 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 OLFM3Q96PB7 478 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 TBCBQ99426 244 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 CALN1Q9BXU9 219 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 XAB2Q9HCS7 855 aaKnown RBP13.52□□□□□ -0.24
SKP2-209ENST00000620197 BTBD7Q9P203 1132 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 CPSF2Q9P2I0 782 aaKnown RBP13.52□□□□□ -0.24
SKP2-209ENST00000620197 PPARGC1AQ9UBK2 798 aaKnown RBP13.52□□□□□ -0.24
SKP2-209ENST00000620197 ADAMTS6Q9UKP5 1117 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 KCNN4O15554 427 aa13.52□□□□□ -0.24
SKP2-209ENST00000620197 PEX1O43933 1283 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms