RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 K7ENM7 598 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 NCK2O43639 380 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 TOM1L1O75674 476 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 HSP90AA1P07900 732 aaKnown RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 CNPP09543 421 aaKnown RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 MCF2P10911 925 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 HARSP12081 509 aaKnown RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 CASP1P29466 404 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 ADSSP30520 456 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 NDUFV1P49821 464 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 SEPHS1P49903 392 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 TUSC3Q13454 348 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 SMC1AQ14683 1233 aaKnown RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 TCEAL1Q15170 157 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 CDSNQ15517 529 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 SMAD2Q15796 467 aaKnown RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 AAK1Q2M2I8 961 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 RESP18Q5W5W9 173 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 ANKRD54Q6NXT1 300 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 FUT10Q6P4F1 479 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 BORAQ6PGQ7 559 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 ZNF720Q7Z2F6 126 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 RASSF8Q8NHQ8 419 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 LEO1Q8WVC0 666 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 SUSD6Q92537 303 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 KISS1RQ969F8 398 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 HPS3Q969F9 1004 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 C18orf25Q96B23 403 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 CDCA3Q99618 268 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 ADPGKQ9BRR6 497 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 MENTQ9BUN1 341 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 APOL5Q9BWW9 433 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 ST6GALNAC4Q9H4F1 302 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 LARSQ9P2J5 1176 aaKnown RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 ANKFY1Q9P2R3 1169 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 CD207Q9UJ71 328 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 RCOR1Q9UKL0 485 aa8.12□□□□□ -1.11
CBWD1-228ENST00000619157 USP15Q9Y4E8 981 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-228ENST00000619157 A0A0B4J269 797 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 TTC26A0AVF1 554 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 I3L4J1 428 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 TEX28O15482 410 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 ADAM12O43184 909 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 CUTAO60888 179 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 FUCA1P04066 466 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 KRT18P05783 430 aaKnown RBP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 THP07101 528 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 ADRB2P07550 413 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 WEE2P0C1S8 567 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 CXCL8P10145 99 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 MYBP10242 640 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 IMPDH2P12268 514 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 KCNE1P15382 129 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 HOXD13P35453 343 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 STAT6P42226 847 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 CLCN4P51793 760 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 CLCNKBP51801 687 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 GUCY2FP51841 1108 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 DSG1Q02413 1049 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 SPAG1Q07617 926 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 HSP90AA2PQ14568 343 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 NOLC1Q14978 699 aaKnown RBP eCLIP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 ZBTB6Q15916 424 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 UPP1Q16831 310 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 PRSS55Q6UWB4 352 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 CRELD2Q6UXH1 353 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 RSPO2Q6UXX9 243 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 GRAMD1CQ8IYS0 662 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 HACE1Q8IYU2 909 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 C12orf76Q8N812 135 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 DHX58Q96C10 678 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 FAM193BQ96PV7 902 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-228ENST00000619157 RPS6KC1Q96S38 1066 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 TRIM9Q9C026 710 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 ZHX3Q9H4I2 956 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 TBC1D7Q9P0N9 293 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 TUBGCP4Q9UGJ1 667 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 ADAM28Q9UKQ2 775 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 PPT2Q9UMR5 302 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 STYXL1Q9Y6J8 313 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 MYH11P35749 1972 aa8.11□□□□□ -1.11
CBWD1-228ENST00000619157 TRIP11Q15643 1979 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 VWA8A3KMH1 1905 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 TMEM189-UBE2V1I3L0A0 370 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 DDX3XO00571 662 aaKnown RBP eCLIP8.1□□□□□ -1.11
CBWD1-228ENST00000619157 PPEF2O14830 753 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 CLDN3O15551 220 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 TBCAO75347 108 aaKnown RBP8.1□□□□□ -1.11
CBWD1-228ENST00000619157 BRCC3P46736 316 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 STRN3Q13033 797 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 FAM26FQ5R3K3 315 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 CD300LDQ6UXZ3 194 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 ETV3LQ6ZN32 361 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 CCDC73Q6ZRK6 1079 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 FAM124AQ86V42 546 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 KYQ8NBH2 561 aa8.1□□□□□ -1.11
CBWD1-228ENST00000619157 TXNDC5Q8NBS9 432 aaKnown RBP8.1□□□□□ -1.11
CBWD1-228ENST00000619157 LNX1Q8TBB1 728 aaPredicted RBP8.1□□□□□ -1.11
CBWD1-228ENST00000619157 KCNG4Q8TDN1 519 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms