RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 CSPG4P5Q96PW8 444 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 LGMNQ99538 433 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 TMEM120AQ9BXJ8 343 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 CEP41Q9BYV8 373 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 PLEKHA5Q9HAU0 1116 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 KCNK13Q9HB14 408 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 MTMR10Q9NXD2 777 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 SPAG6O75602 509 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 KRT37O76014 449 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 TOP3BO95985 862 aaKnown RBP11.6□□□□□ -0.55
TP53-223ENST00000618944 APOEP02649 317 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 DHRS4L1P0CG22 281 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 SERPINB3P29508 390 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 PRKD1Q15139 912 aaPredicted RBP11.6□□□□□ -0.55
TP53-223ENST00000618944 BSPRYQ5W0U4 402 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 SMYD5Q6GMV2 418 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 CASC4Q6P4E1 433 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 CDKL3Q8IVW4 592 aaPredicted RBP11.6□□□□□ -0.55
TP53-223ENST00000618944 ANKRD52Q8NB46 1076 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 FAM13CQ8NE31 585 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 KBTBD7Q8WVZ9 684 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 EMID1Q96A84 441 aaPredicted RBP11.6□□□□□ -0.55
TP53-223ENST00000618944 FAM149B1Q96BN6 582 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 EBF2Q9HAK2 575 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 PNPLA8Q9NP80 782 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 ARL8BQ9NVJ2 186 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 SLC17A6Q9P2U8 582 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 KPNA7A9QM74 516 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 CLDN5O00501 218 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 RFPL1O75677 317 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 SETSIPP0DME0 302 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 KITP10721 976 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 RABGGTBP53611 331 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 SNX16P57768 344 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 PITX1P78337 314 aaPredicted RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 IRX4P78413 519 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 BST2Q10589 180 aaKnown RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 DPYSL2Q16555 572 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 CTC1Q2NKJ3 1217 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 PARP6Q2NL67 630 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 DUSP28Q4G0W2 176 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 FBXO47Q5MNV8 452 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 NOTUMQ6P988 496 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 ZNF534Q76KX8 674 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 DNAJB3Q8WWF6 145 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 LENG1Q96BZ8 264 aaPredicted RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 SIGLEC10Q96LC7 697 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 DTLQ9NZJ0 730 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 NOP53Q9NZM5 478 aaKnown RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 PIN4Q9Y237 131 aaKnown RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 DNAH12Q6ZR08 3092 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 SMIM28A0A1B0GU29 152 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 WDR27A2RRH5 827 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 TRDMT1O14717 391 aaKnown RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 GCATO75600 419 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 MYL2P10916 166 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 CYP2C9P11712 490 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 IGFBP6P24592 240 aaPredicted RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 PRKCHP24723 683 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 ACAT1P24752 427 aaKnown RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 RASSF2P50749 326 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 MRPS5P82675 430 aaKnown RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 HIC1Q14526 733 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 LDLRAD1Q5T700 205 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 LGSNQ5TDP6 509 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 ARHGAP17Q68EM7 881 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 NCBP2-AS2Q69YL0 99 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 HEATR6Q6AI08 1181 aaKnown RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 ALKAL1Q6UXT8 129 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 GPR142Q7Z601 462 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 UNC93AQ86WB7 457 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 DEFB106AQ8N104 65 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 LRRC52Q8N7C0 313 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 TTC8Q8TAM2 541 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 TMEM40Q8WWA1 233 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 INPP5DQ92835 1189 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 MAML3Q96JK9 1138 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 EBNA1BP2Q99848 306 aaKnown RBP11.59□□□□□ -0.55
TP53-223ENST00000618944 PCMTD2Q9NV79 361 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.55
TP53-223ENST00000618944 SEPT10Q9P0V9 454 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 ARMCX1Q9P291 453 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 C15orf41Q9Y2V0 281 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 PLLPQ9Y342 182 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 SCN1AP35498 2009 aa11.59□□□□□ -0.55
TP53-223ENST00000618944 CCL15-CCL14A0A0B4J2E2 113 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 HMX2A2RU54 273 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 H0Y3Z8 333 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 ENTPD5O75356 428 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 DLDP09622 509 aaKnown RBP11.58□□□□□ -0.56
TP53-223ENST00000618944 SMIM10L2AP0DMW4 78 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 SMIM10L2BP0DMW5 78 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 VAV1P15498 845 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 GM2AP17900 193 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 TKTP29401 623 aaKnown RBP11.58□□□□□ -0.56
TP53-223ENST00000618944 NDUFV1P49821 464 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 SOX4Q06945 474 aaPredicted RBP11.58□□□□□ -0.56
TP53-223ENST00000618944 CCL15Q16663 113 aa11.58□□□□□ -0.56
TP53-223ENST00000618944 DCAF6Q58WW2 860 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms