RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 PDGFRAP16234 1089 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SLC44A4Q53GD3 710 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 CCDC122Q5T0U0 273 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 TAC4Q86UU9 113 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 C12orf40Q86WS4 652 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 WDTC1Q8N5D0 677 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 OR6K2Q8NGY2 324 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 GANCQ8TET4 914 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 ATRIPQ8WXE1 791 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FUBP3Q96I24 572 aaKnown RBP eCLIP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 RPRD1AQ96P16 312 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 HHIPQ96QV1 700 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SELENOOQ9BVL4 669 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 STK33Q9BYT3 514 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 GPR88Q9GZN0 384 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FBXO44Q9H4M3 255 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 WDR70Q9NW82 654 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SPATA6Q9NWH7 488 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 ZNHIT6Q9NWK9 470 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 CACNA2D2Q9NY47 1150 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 R4GN57 208 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 ACACAQ13085 2346 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 A0A087X0T9 212 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 GOLGA6L3A6NEY3 463 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SOWAHDA6NJG2 315 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 TRUB2O95900 331 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FAM228BP0C875 321 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 POU3F3P20264 500 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 PTMSP20962 102 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 RFC1P35251 1148 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 HARS2P49590 506 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SGSHP51688 502 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FMO1Q01740 532 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SEMG2Q02383 582 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 HTR4Q13639 388 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 CNGA2Q16280 664 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SPECC1LQ69YQ0 1117 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 LCLAT1Q6UWP7 414 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 LINGO4Q6UY18 593 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 PRR23BQ6ZRT6 265 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 ELOA2Q8IYF1 753 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 PYROXD2Q8N2H3 581 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 HSPH1Q92598 858 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 MYEOVQ96EZ4 313 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 CCDC42Q96M95 316 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 ACOX2Q99424 681 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 PKMYT1Q99640 499 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 MYOCQ99972 504 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 TMEM121BQ9BXQ6 578 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DNAI2Q9GZS0 605 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 ARHGEF4Q9NR80 690 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 BCCIPQ9P287 314 aaKnown RBP eCLIP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 CTTNBP2NLQ9P2B4 639 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 UXTQ9UBK9 157 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DNAI1Q9UI46 699 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 ACTL7AQ9Y615 435 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DSPP15924 2871 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DMXL2Q8TDJ6 3036 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 A0A1B0GTH6 734 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 TNFRSF10BO14763 440 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DCLK1O15075 740 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 MAPK13O15264 365 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 RNF40O75150 1001 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 KRT3P12035 628 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 IRAK1P51617 712 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 YWHAZP63104 245 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DYNLT1P63172 113 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 NR1I3Q14994 352 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 NFIL3Q16649 462 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 LRRC73Q5JTD7 316 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 PRSS36Q5K4E3 855 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DNAJC24Q6P3W2 148 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 CCDC186Q7Z3E2 898 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 ADAT2Q7Z6V5 191 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 MON1AQ86VX9 555 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FAM71AQ8IYT1 594 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 LGI2Q8N0V4 545 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 RYBPQ8N488 228 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FAM160A2Q8N612 972 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FRMD1Q8N878 549 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DQX1Q8TE96 717 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SLC35F5Q8WV83 523 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 HMGB4Q8WW32 186 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FAM3CQ92520 227 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 IRF7Q92985 503 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 AGPAT1Q99943 283 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 FAM118BQ9BPY3 351 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 THAP2Q9H0W7 228 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SMOC1Q9H4F8 434 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SUDS3Q9H7L9 328 aaPredicted RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 LMAN1LQ9HAT1 526 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 THG1LQ9NWX6 298 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 TRMT1Q9NXH9 659 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 DNMT3LQ9UJW3 386 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 LSM7Q9UK45 103 aaKnown RBP4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SIT1Q9Y3P8 196 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 SPTA1P02549 2419 aa4.81□□□□□ -1.64
SYCP1-210ENST00000618516 TMEM221A6NGB7 291 aa4.8□□□□□ -1.64
SYCP1-210ENST00000618516 PI4K2BG5E9Z4 385 aa4.8□□□□□ -1.64
SYCP1-210ENST00000618516 H0Y626 953 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms