RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 RGS16O15492 202 aaPredicted RBP11.28□□□□□ -0.6
POLR2A-209ENST00000617998 IFNA16P05015 189 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
POLR2A-209ENST00000617998 UBE3AQ05086 875 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 TMEM63BQ5T3F8 832 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 NAPEPLDQ6IQ20 393 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 SERAC1Q96JX3 654 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 ULBP1Q9BZM6 244 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 HAUS4Q9H6D7 363 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 ARFGAP3Q9NP61 516 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 CISHQ9NSE2 258 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 SIRPGQ9P1W8 387 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 TSPAN16Q9UKR8 245 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 BOLA3Q53S33 107 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 FAM129CQ86XR2 697 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 ZNF614Q8N883 585 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 MGARPQ8TDB4 240 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 RTP3Q9BQQ7 232 aa11.28□□□□□ -0.6
POLR2A-209ENST00000617998 TRMT6Q9UJA5 497 aaKnown RBP11.28□□□□□ -0.6
POLR2A-209ENST00000617998 RTN2O75298 545 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 GCATO75600 419 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 BMP10O95393 424 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 COL6A1P12109 1028 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 GLRA2P23416 452 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 YWHAZP63104 245 aaKnown RBP11.27□□□□□ -0.6
POLR2A-209ENST00000617998 EXOSC10Q01780 885 aaKnown RBP11.27□□□□□ -0.6
POLR2A-209ENST00000617998 CYP24A1Q07973 514 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 HID1Q8IV36 788 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 NEUROG2Q9H2A3 272 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 SPASTQ9UBP0 616 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 DNPEPQ9ULA0 475 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 ADGRA3Q8IWK6 1321 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 C5orf58C9J3I9 102 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 LARGE1O95461 756 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 POLBP06746 335 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 NCKAP1LP55160 1127 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 TAF10Q12962 218 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 COBLL1Q53SF7 1204 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 ZNF677Q86XU0 584 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 MAGEC3Q8TD91 643 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 CD101Q93033 1021 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 C7orf25Q9BPX7 421 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 FAM114A2Q9NRY5 505 aa11.27□□□□□ -0.6
POLR2A-209ENST00000617998 GNGT2O14610 69 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 GTF2E2P29084 291 aaKnown RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 STX2P32856 288 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 ENOX1Q8TC92 643 aaKnown RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 C2orf15Q8WU43 125 aaKnown RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 RERGQ96A58 199 aaPredicted RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 REXO5Q96IC2 774 aaKnown RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 CBWD1Q9BRT8 395 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 C9J4A7 227 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 KHNYNO15037 678 aaKnown RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 TUBBP07437 444 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 NCALDP61601 193 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 LINC00523Q86TU6 105 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 BRSK2Q8IWQ3 736 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 GJD3Q8N144 294 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 C10orf53Q8N6V4 93 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 IL31RAQ8NI17 732 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 TM6SF2Q9BZW4 377 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 SEPT3Q9UH03 358 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 JADE3Q92613 823 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 ZBTB45Q96K62 511 aaPredicted RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 SLC2A4RGQ9NR83 387 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 GKN1Q9NS71 199 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 DNAJC16Q9Y2G8 782 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 TCRBV5S4A2TA0A5A2 114 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 MIF4GDA9UHW6 222 aaKnown RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 CYP3A4P08684 503 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 ELFN1P0C7U0 828 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 DIS3LQ8TF46 1054 aaKnown RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 PKNOX2Q96KN3 472 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 ZFP42Q96MM3 310 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 NUF2Q9BZD4 464 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
POLR2A-209ENST00000617998 CPQQ9Y646 472 aa11.27□□□□□ -0.61
POLR2A-209ENST00000617998 SLIT3O75094 1523 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 GOLGA8MH3BSY2 632 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 ANTXR2P58335 489 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 SEMA3FQ13275 785 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 PTK6Q13882 451 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 KRT71Q3SY84 523 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 NDEL1Q9GZM8 345 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 TBC1D13Q9NVG8 400 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 WWOXQ9NZC7 414 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 TPX2Q9ULW0 747 aaKnown RBP11.26□□□□□ -0.61
POLR2A-209ENST00000617998 CRYL1Q9Y2S2 319 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 FTCDO95954 541 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 DPP6P42658 865 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 PRRX2Q99811 253 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 RABEP2Q9H5N1 569 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 RGS18Q9NS28 235 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 SRP72O76094 671 aaKnown RBP11.26□□□□□ -0.61
POLR2A-209ENST00000617998 ARF4P18085 180 aaPredicted RBP11.26□□□□□ -0.61
POLR2A-209ENST00000617998 CXCL12P48061 93 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms