RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 ATF2P15336 505 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CHKAP35790 457 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 GJA8P48165 433 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SKIDA1Q1XH10 827 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 LRIG3Q6UXM1 1119 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 TMCO2Q7Z6W1 182 aaPredicted RBP21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 OR2W6PQ8NHA6 318 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SLC7A14Q8TBB6 771 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 LRRC45Q96CN5 670 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 NCAPGQ9BPX3 1015 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 WDR6Q9NNW5 1121 aaKnown RBP21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ABI2Q9NYB9 513 aaPredicted RBP21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 NFS1Q9Y697 457 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SRRM3A6NNA2 597 aaPredicted RBP21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 NDUFAB1O14561 156 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SYN3O14994 580 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 MAP3K6O95382 1288 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 DESP17661 470 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 FGFR3P22607 806 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 GPR15P49685 360 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 RTP2Q5QGT7 225 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SDHAF4Q5VUM1 108 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SLC9A4Q6AI14 798 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 C1orf228Q6PIY5 440 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 MAP7D3Q8IWC1 876 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 UNC45BQ8IWX7 931 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 LRRN4Q8WUT4 740 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 PGLYRP2Q96PD5 576 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ZNF670Q9BS34 389 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 MAK16Q9BXY0 300 aaKnown RBP21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 PLAAQ9Y263 795 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 MFHAS1Q9Y4C4 1052 aa21.43■■□□□ 1.02
CNTNAP3B-212ENST00000617422 VGLL3A8MV65 326 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 HSPA8P11142 646 aaKnown RBP21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ITIH2P19823 946 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 GBP1P32455 592 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 GRIK1P39086 918 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CALCOCO2Q13137 446 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 NOMO1Q15155 1222 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 P3H1Q32P28 736 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 FUT10Q6P4F1 479 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 C4orf50Q6ZRC1 276 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CCDC89Q8N998 374 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 TTC13Q8NBP0 860 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ATP6V1G3Q96LB4 118 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 STAP1Q9ULZ2 295 aa21.42■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SGK1O00141 431 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CAPN9O14815 690 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 NR1D1P20393 614 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 RDXP35241 583 aaKnown RBP21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SLC5A3P53794 718 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 EIF3EP60228 445 aaKnown RBP21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 LMNB2Q03252 620 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 IFRD2Q12894 506 aaPredicted RBP21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CTXN3Q4LDR2 81 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 BSPRYQ5W0U4 402 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ZC3H18Q86VM9 953 aaKnown RBP21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 UBLCP1Q8WVY7 318 aaPredicted RBP21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CSPG4P5Q96PW8 444 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 COLEC11Q9BWP8 271 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 PNPLA8Q9NP80 782 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 GOLGA6L10A6NI86 522 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 HOXA2O43364 376 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 PARNO95453 639 aaKnown RBP21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 IFNB1P01574 187 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CLTBP09497 229 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 GOT1P17174 413 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 DEUP1Q05D60 604 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 KCTD16Q68DU8 428 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 MICALL1Q8N3F8 863 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SH2D3CQ8N5H7 860 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ATAD1Q8NBU5 361 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 EPN3Q9H201 632 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SEMA4AQ9H3S1 761 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ETNK2Q9NVF9 386 aa21.41■■□□□ 1.02
CNTNAP3B-212ENST00000617422 VNN2O95498 520 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 RBP3P10745 1247 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SLC10A2Q12908 348 aaPredicted RBP21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 TFDP2Q14188 446 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 DDR2Q16832 855 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 IZUMO3Q5VZ72 239 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 MICALCLQ6ZW33 695 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 VSIG1Q86XK7 387 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SCN4BQ8IWT1 228 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ARFGAP2Q8N6H7 521 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 MRPL9Q9BYD2 267 aaKnown RBP21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 HEY1Q9Y5J3 304 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 LTBP2Q14767 1821 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 MYO16Q9Y6X6 1858 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 TRIM43BA6NCK2 446 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 APOL1O14791 398 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 LSP1P33241 339 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 GPS1Q13098 491 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 TTC19Q6DKK2 380 aaPredicted RBP21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CNKSR3Q6P9H4 555 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SCML4Q8N228 414 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 FAM71DQ8N9W8 422 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 IRGQQ8WZA9 623 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 P3H4Q92791 437 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms