RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 GTF2BQ00403 316 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 PIGHQ14442 188 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 FAM98CQ17RN3 349 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 FSCBQ5H9T9 825 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 PPM1JQ5JR12 505 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TRAPPC3LQ5T215 181 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TDRD10Q5VZ19 366 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 C10orf107Q8IVU9 208 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 ZNF786Q8N393 782 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 GRIN3AQ8TCU5 1115 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 CRYGNQ8WXF5 182 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 LZICQ8WZA0 190 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 LENG8Q96PV6 779 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 TMEM79Q9BSE2 394 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 HAUS8Q9BT25 410 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 MRPS26Q9BYN8 205 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 NRDE2Q9H7Z3 1164 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.89□□□□□ -1.31
LMO3-235ENST00000616247 ZNF358Q9NW07 568 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 RSL24D1Q9UHA3 163 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 AGO2Q9UKV8 859 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 NUB1Q9Y5A7 615 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 NR2E3Q9Y5X4 410 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 GOLGB1Q14789 3259 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 NHSL1Q5SYE7 1610 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 TCP10L2B9ZVM9 353 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 DHRS4L1P0CG22 281 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 SMIM18P0DKX4 95 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 XRCC1P18887 633 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 IL1R2P27930 398 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 SLC5A3P53794 718 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 RPS6P62753 249 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 MRPS5P82675 430 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 SLC18A2Q05940 514 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 PTP4A2Q12974 167 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 TBCCQ15814 346 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 CCDC92Q53HC0 331 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 PPM1LQ5SGD2 360 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 CYP2R1Q6VVX0 501 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 KYAT3Q6YP21 454 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 UTS2BQ765I0 119 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 FASTKD5Q7L8L6 764 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 LDHDQ86WU2 507 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 TRIM50Q86XT4 487 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 ZNF677Q86XU0 584 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 TMEM161BQ8NDZ6 487 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 SLC35B2Q8TB61 432 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 MZB1Q8WU39 189 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 BSNDQ8WZ55 320 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 TMEM143Q96AN5 459 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 ABHD8Q96I13 439 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 ZNF512Q96ME7 567 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 MXRA8Q9BRK3 442 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 MSTO1Q9BUK6 570 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 TARS2Q9BW92 718 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 KLC2Q9H0B6 622 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 DHX35Q9H5Z1 703 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 APOBEC3GQ9HC16 384 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 TBC1D22BQ9NU19 505 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 SEPT10Q9P0V9 454 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 GABBR1Q9UBS5 961 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 DNAJB4Q9UDY4 337 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 PSMD13Q9UNM6 376 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 COL18A1P39060 1754 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 CLRN2A0PK11 232 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 SDR42E2A6NKP2 422 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 RALBP11234 206 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 KDELR1P24390 212 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 RBL1P28749 1068 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 CPOXP36551 454 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 IDH3AP50213 366 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 MTTPP55157 894 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 BCAR1P56945 870 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 PHEXP78562 749 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 MRPS9P82933 396 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 MYBPC1Q00872 1141 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 WASHC5Q12768 1159 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 ANKDD1AQ495B1 522 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 ZBTB41Q5SVQ8 909 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 IL31Q6EBC2 164 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 BNC2Q6ZN30 1099 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 OR5B17Q8NGF7 314 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 DEPTORQ8TB45 409 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 DDI1Q8WTU0 396 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 TFB1MQ8WVM0 346 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 CCDC97Q96F63 343 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 SCYL1Q96KG9 808 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 CEP41Q9BYV8 373 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 UNKQ9C0B0 810 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 TBC1D23Q9NUY8 699 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 PDLIM1O00151 329 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 FAM163BP0C2L3 166 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 OCM2P0CE71 109 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 OCMP0CE72 109 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 MCF2P10911 925 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 P4HA1P13674 534 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 MMP8P22894 467 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 EPHA3P29320 983 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 POLR2BP30876 1174 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms