RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TRUB2O95900 331 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 IGSF6O95976 241 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 GLUD1P00367 558 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 VCPP55072 806 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 MIIPQ5JXC2 388 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SZRD1Q7Z422 152 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 ADCK2Q7Z695 626 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 CELF6Q96J87 481 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 CORO1BQ9BR76 489 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM167BQ9BTA0 163 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SPATA16Q9BXB7 569 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 GANQ9H2C0 597 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 SYNDIG1Q9H7V2 258 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 TRIM45Q9H8W5 580 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 CD274Q9NZQ7 290 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 TRMT6Q9UJA5 497 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 PCDHA3Q9Y5H8 950 aa9.74□□□□□ -0.85
CLTCL1-208ENST00000615606 GOLGA8RI6L899 631 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 PJA2O43164 708 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 FGF19O95750 216 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 ATP5BP06576 529 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 VCLP18206 1134 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 HDCP19113 662 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 CARSP49589 748 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 MBTD1Q05BQ5 628 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 ARHGAP1Q07960 439 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 LONRF1Q17RB8 773 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 ERAP2Q6P179 960 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 NPAS4Q8IUM7 802 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 C7orf61Q8IZ16 206 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 LENG9Q96B70 501 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 UBE2OQ9C0C9 1292 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 STN1Q9H668 368 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 MRPL40Q9NQ50 206 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 PCMTD2Q9NV79 361 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 F8VP50 259 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 C22orf31O95567 290 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 BRCC3P46736 316 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM133BQ5BKY9 247 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 TRIM68Q6AZZ1 485 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 SPATA20Q8TB22 786 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 PCDH9Q9HC56 1237 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 TXNRD2Q9NNW7 524 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 ORC6Q9Y5N6 252 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 SUPT3HB4E1H0 165 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 OPHN1O60890 802 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 SUPT3HO75486 399 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 MYL2P10916 166 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 RARGP13631 454 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 BMP6P22004 513 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 CHKAP35790 457 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 MAPRE2Q15555 327 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM35AQ86V20 835 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 TRIM48Q8IWZ4 208 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 COLGALT1Q8NBJ5 622 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 VAT1Q99536 393 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 TMEM121Q9BTD3 319 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 C11orf49Q9H6J7 331 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 GRID1Q9ULK0 1009 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 PCDHGB4Q9UN71 923 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 L3MBTL1Q9Y468 752 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 TLL2Q9Y6L7 1015 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 LTBP4Q8N2S1 1624 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 GMNCA6NCL1 334 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 VPS26AO75436 327 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 EOMESO95936 686 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 AMPD1P23109 780 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 ACBD5Q5T8D3 534 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 CCDC33Q8N5R6 958 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 SGSM3Q96HU1 749 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 ACTR5Q9H9F9 607 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 CASS4Q9NQ75 786 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 UBA2Q9UBT2 640 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 FBXL21Q9UKT6 434 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 SLC39A10Q9ULF5 831 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM50BQ9Y247 325 aa9.73□□□□□ -0.85
CLTCL1-208ENST00000615606 LAMB4A4D0S4 1761 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 RBAK-RBAKDNI3L0D1 243 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 CES2O00748 559 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 XPO1O14980 1071 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 MAP3K13O43283 966 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ATP5HO75947 161 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 SRP72O76094 671 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ERBB2P04626 1255 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 SLC10A3P09131 477 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 CDC25CP30307 473 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ZNF143P52747 638 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 SESN3P58005 492 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 DMTNQ08495 405 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM83EQ2M2I3 478 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 AGBL2Q5U5Z8 902 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM183BPQ6ZVS7 135 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 CTU1Q7Z7A3 348 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 NOA1Q8NC60 698 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 THOC1Q96FV9 657 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 DUSP16Q9BY84 665 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 KDM4CQ9H3R0 1056 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM124BQ9H5Z6 455 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms