RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 CCDC81Q6ZN84 652 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 TPGS1Q6ZTW0 290 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 RUFY3Q7L099 469 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 ADAT2Q7Z6V5 191 aaKnown RBP7.29□□□□□ -1.24
MUC1-227ENST00000615517 LSMEM2Q8N112 164 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 TMEM86AQ8N2M4 240 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 RBBP8NLQ8NC74 664 aaPredicted RBP7.29□□□□□ -1.24
MUC1-227ENST00000615517 CEP295NLQ96MC4 621 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 SLC6A18Q96N87 628 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 XPO6Q96QU8 1125 aaKnown RBP7.29□□□□□ -1.24
MUC1-227ENST00000615517 MSTO1Q9BUK6 570 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 CCSER2Q9H7U1 834 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 POLR1BQ9H9Y6 1135 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 EBF2Q9HAK2 575 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 FBXO10Q9UK96 956 aa7.29□□□□□ -1.24
MUC1-227ENST00000615517 SDK2Q58EX2 2172 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 NPHP3-ACAD11A0A0J9YXS1 232 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 ANKRD63C9JTQ0 380 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 HNRNPDLO14979 420 aaKnown RBP7.28□□□□□ -1.24
MUC1-227ENST00000615517 HUS1O60921 280 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 USP12O75317 370 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 SEMA4FO95754 770 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 FAM87AP0C7U9 286 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 C7P10643 843 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 POLR2BP30876 1174 aaKnown RBP7.28□□□□□ -1.24
MUC1-227ENST00000615517 ZNF132P52740 706 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 SMTNP53814 917 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 C21orf59P57076 290 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 IFRD2Q12894 506 aaPredicted RBP7.28□□□□□ -1.24
MUC1-227ENST00000615517 CLN3Q13286 438 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 ZNF234Q14588 700 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 ZNF174Q15697 407 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 IGFBP7Q16270 282 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 CRELD2Q6UXH1 353 aaPredicted RBP7.28□□□□□ -1.24
MUC1-227ENST00000615517 C4orf50Q6ZRC1 276 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 HTR3DQ70Z44 454 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 DIS3L2Q8IYB7 885 aaKnown RBP7.28□□□□□ -1.24
MUC1-227ENST00000615517 C4orf32Q8N8J7 132 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 C1orf127Q8N9H9 656 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 KBTBD7Q8WVZ9 684 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 EXTL1Q92935 676 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 KCNN1Q92952 543 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 BHMTQ93088 406 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 PCED1BQ96HM7 432 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 C8orf48Q96LL4 319 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 ZNF560Q96MR9 790 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 MMS19Q96T76 1030 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 SYT15Q9BQS2 421 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 ACE2Q9BYF1 805 aaPredicted RBP7.28□□□□□ -1.24
MUC1-227ENST00000615517 ZSWIM6Q9HCJ5 1215 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 GDAP2Q9NXN4 497 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 PLK2Q9NYY3 685 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 ORC3Q9UBD5 711 aaPredicted RBP7.28□□□□□ -1.24
MUC1-227ENST00000615517 SEPT3Q9UH03 358 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 CHORDC1Q9UHD1 332 aaPredicted RBP7.28□□□□□ -1.24
MUC1-227ENST00000615517 AGAP1Q9UPQ3 857 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 DNM3Q9UQ16 869 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 NME7Q9Y5B8 376 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 F8P00451 2351 aa7.28□□□□□ -1.24
MUC1-227ENST00000615517 PTPRJQ12913 1337 aa7.27□□□□□ -1.24
MUC1-227ENST00000615517 A0A1W2PR77 199 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 PMS2P1A4D2B8 440 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 PP2D1A8MPX8 630 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 TRIM38O00635 465 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 SYNCRIPO60506 623 aaKnown RBP7.27□□□□□ -1.25
MUC1-227ENST00000615517 CSO75390 466 aaKnown RBP7.27□□□□□ -1.25
MUC1-227ENST00000615517 CDKL5O76039 1030 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 ITGB3P05106 788 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 EPHX1P07099 455 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 PLCG1P19174 1290 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 ANXA13P27216 316 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 PSMA5P28066 241 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 PCSK1P29120 753 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 PNPLA4P41247 253 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 LHX1P48742 406 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 PGFP49763 221 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 FOSBP53539 338 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 BCAT1P54687 386 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 MFAP3P55082 362 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 CDH8P55286 799 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 RIPPLY3P57055 190 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 RACK1P63244 317 aaKnown RBP7.27□□□□□ -1.25
MUC1-227ENST00000615517 E2F1Q01094 437 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 CYP27A1Q02318 531 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 GRIN1Q05586 938 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 HECTD3Q5T447 861 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 SNX30Q5VWJ9 437 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 TDRD10Q5VZ19 366 aaKnown RBP7.27□□□□□ -1.25
MUC1-227ENST00000615517 IGF2-ASQ6U949 168 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 LIMS2Q7Z4I7 341 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 TOP6BLQ8N6T0 577 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 OR2T3Q8NH03 318 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 SNX29Q8TEQ0 813 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 SORCS1Q8WY21 1168 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 PRR11Q96HE9 360 aaPredicted RBP7.27□□□□□ -1.25
MUC1-227ENST00000615517 SLITRK1Q96PX8 696 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 SEMA3CQ99985 751 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 MMTAG2Q9BU76 263 aaKnown RBP7.27□□□□□ -1.25
MUC1-227ENST00000615517 TIPINQ9BVW5 301 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 BTBD1Q9H0C5 482 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms